HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.7 nTPM
HPA:61.7 nTPM
GTEx:40.6 nTPM
FANTOM5:23.7 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:3.1 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050816
Glial cells High
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.7
Sample id Sample description nTPM
Hippocampus
nTPM: 59.1
2529 Female, age 94, left hemisphere 60.8
2148 Female, age 91, left hemisphere 60.5
1911 Female, age 85, right hemisphere 60.2
2621 Female, age 67, right hemisphere 59.1
1898 Male, age 80, left hemisphere 57.3
1855 Male, age 76, left hemisphere 56.9
Dentate gyrus
nTPM: 59.3
2530 Female, age 94, left hemisphere 63.7
2528 Male, age 74, both hemispheres 60.4
2531 Female, age 67, both hemispheres 58.7
2246 Female, age 85, both hemispheres 58.1
2010 Male, age 76, both hemispheres 58.0
1927 Female, age 91, both hemispheres 56.9
Entorhinal gyrus
nTPM: 61.7
2686 Male, age 75, right hemisphere 64.0
2613 Female, age 94, left hemisphere 63.5
2764 Male, age 80, right hemisphere 62.5
1787 Male, age 76, left hemisphere 61.9
2117 Female, age 91, right hemisphere 61.4
1938 Female, age 85, left hemisphere 57.1
Hippocampus, CA1
nTPM: 57.6
2082 Female, age 91, right hemisphere 61.6
1873 Female, age 85, both hemispheres 57.8
2045 Male, age 76, both hemispheres 56.5
2527 Male, age 74, both hemispheres 56.3
2749 Male, age 80, left hemisphere 55.8
Hippocampus, CA2
nTPM: 59.4
1963 Male, age 80, left hemisphere 61.7
2113 Female, age 91, right hemisphere 60.1
1940 Female, age 85, left hemisphere 59.9
2437 Female, age 94, left hemisphere 59.0
2249 Male, age 74, both hemispheres 58.0
1892 Male, age 76, both hemispheres 57.5
Hippocampus, CA3
nTPM: 58.2
2436 Male, age 74, both hemispheres 61.5
2861 Female, age 67, both hemispheres 59.4
1891 Female, age 85, both hemispheres 59.0
1867 Male, age 76, both hemispheres 57.0
2620 Female, age 94, left hemisphere 56.3
2137 Male, age 80, left hemisphere 55.8
Parahippocampal cortex
nTPM: 58.9
2622 Female, age 67, right hemisphere 62.0
2692 Male, age 74, both hemispheres 61.2
1990 Female, age 91, right hemisphere 60.8
2532 Female, age 72, left hemisphere 59.2
2693 Female, age 94, both hemispheres 58.4
1933 Female, age 85, both hemispheres 57.9
1850 Male, age 80, both hemispheres 57.7
2018 Male, age 76, both hemispheres 57.4
2245 Female, age 91, both hemispheres 57.4
2250 Female, age 67, right hemisphere 57.1
Perirhinal gyrus
nTPM: 57.6
1794 Male, age 80, right hemisphere 58.2
2521 Female, age 94, right hemisphere 58.1
2848 Male, age 76, right hemisphere 58.0
1847 Female, age 91, left hemisphere 57.8
1841 Female, age 85, right hemisphere 56.3
Subiculum
nTPM: 59.7
2438 Female, age 94, left hemisphere 60.6
2619 Male, age 74, both hemispheres 60.4
2729 Female, age 91, right hemisphere 59.9
1901 Male, age 80, both hemispheres 59.8
1977 Female, age 85, both hemispheres 59.2
2042 Male, age 76, both hemispheres 58.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.6
Samples: 197

Max nTPM: 83.0
Min nTPM: 18.6
Std nTPM: 11.0
Median nTPM: 38.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 83.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 80.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 71.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 69.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 68.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 66.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 65.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 65.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 60.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.7
FF:10153-102I9 76 years, female 33.8
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 31.3
Min nTPM: 20.1
Sample A Female 31.3
Sample B Female 24.4
Sample C Male 26.4
Sample D Male 20.1
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 36.4
Min nTPM: 24.9
Sample A Female 30.3
Sample B Female 27.5
Sample C Male 36.4
Sample D Male 24.9
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 35.0
Min nTPM: 22.8
Sample A Female 35.0
Sample B Female 26.7
Sample C Male 29.2
Sample D Male 22.8
Ventral hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 37.7
Min nTPM: 21.5
Sample A Female 23.8
Sample B Female 21.5
Sample C Male 37.7
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.8
Sample A Male 3.4
Sample B Male 2.8
Sample C Female 1.8
Sample D Female 3.9
Hippocampal formation
nTPM: 3.1
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.4
Sample A Male 2.4
Sample B Male 3.3
Sample C Female 2.6
Sample D Female 4.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
68910986 Antisense, RP_050203_01_F12, Mouse strain C57BL/6J (56 days, male) 2.3

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