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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:146.6 nTPM
FANTOM5:182.5 Scaled Tags Per Million
Pig:60.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA007865Antibody CAB025862
Glial cells Not detectedMedium
Neuronal cells -Medium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 146.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 146.6
Samples: 246

Max nTPM: 361.5
Min nTPM: 31.1
Std nTPM: 56.1
Median nTPM: 139.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 361.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 326.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 319.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 312.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 308.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 276.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 274.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 272.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 270.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 266.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 264.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 255.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 250.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 250.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 249.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 243.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 234.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 228.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 225.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 224.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 221.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 221.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 218.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 213.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 212.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 211.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 209.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 208.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 208.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 207.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 206.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 206.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 204.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 203.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 202.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 201.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 201.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 198.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 197.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 197.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 196.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 196.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 195.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 193.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 192.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 191.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 189.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 189.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 188.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 186.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 184.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 183.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 183.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 183.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 182.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 182.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 182.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 182.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 181.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 180.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 180.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 178.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 176.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 176.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 176.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 174.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 174.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 174.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 173.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 173.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 172.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 172.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 172.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 172.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 171.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 171.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 170.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 170.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 168.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 168.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 164.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 162.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 162.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 159.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 157.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 155.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 154.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 152.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 151.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 151.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 150.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 150.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 150.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 150.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 150.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 148.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 148.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 148.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 148.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 148.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 146.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 146.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 146.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 145.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 144.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 143.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 142.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 142.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 142.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 142.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 141.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 141.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 140.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 139.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 139.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 138.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 138.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 138.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 138.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 137.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 137.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 136.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 136.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 134.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 133.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 132.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 132.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 131.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 130.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 130.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 130.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 129.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 129.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 128.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 128.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 128.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 128.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 127.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 127.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 126.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 125.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 124.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 123.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 123.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 122.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 121.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 121.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 121.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 121.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 121.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 121.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 120.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 120.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 119.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 119.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 118.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 117.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 116.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 116.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 115.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 115.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 115.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 114.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 114.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 113.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 112.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 112.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 112.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 112.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 112.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 111.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 111.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 109.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 107.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 107.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 107.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 107.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 107.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 106.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 104.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 104.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 103.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 102.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 102.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 99.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 98.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 95.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 94.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 94.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 93.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 93.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 93.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 92.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 91.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 87.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 86.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 84.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 83.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 81.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 80.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 79.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 78.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 76.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 76.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 76.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 75.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 67.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 61.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 46.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 43.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 38.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 35.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 31.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 182.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 182.5
FF:10164-103B2 76 years, female 182.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 60.6
Pig sample Sample description nTPM
Caudate
nTPM: 60.6
Samples: 4

Max nTPM: 68.9
Min nTPM: 50.2
Sample A Female 50.2
Sample B Female 68.9
Sample C Male 64.0
Sample D Male 59.2

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