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SYT11
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:128.6 nTPM
FANTOM5:571.5 Scaled Tags Per Million
Pig:197.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA064091
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 128.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 128.6
Samples: 246

Max nTPM: 196.0
Min nTPM: 55.7
Std nTPM: 26.7
Median nTPM: 126.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 196.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 193.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 188.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 187.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 185.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 182.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 180.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 178.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 177.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 176.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 175.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 175.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 172.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 172.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 170.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 169.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 168.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 168.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 168.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 168.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 166.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 166.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 165.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 165.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 165.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 163.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 162.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 161.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 161.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 159.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 159.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 159.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 159.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 157.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 156.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 155.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 155.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 154.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 153.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 152.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 152.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 151.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 151.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 151.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 151.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 150.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 150.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 150.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 150.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 150.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 150.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 150.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 149.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 149.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 149.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 149.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 148.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 148.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 147.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 147.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 146.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 146.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 146.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 146.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 145.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 145.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 144.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 144.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 144.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 144.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 144.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 144.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 143.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 143.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 143.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 142.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 142.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 141.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 141.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 140.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 140.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 140.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 140.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 140.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 139.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 139.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 138.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 138.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 138.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 138.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 137.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 137.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 137.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 136.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 136.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 135.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 134.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 134.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 134.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 133.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 132.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 131.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 130.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 130.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 130.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 129.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 128.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 128.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 128.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 128.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 127.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 126.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 126.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 126.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 126.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 126.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 125.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 125.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 125.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 125.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 125.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 124.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 123.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 123.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 123.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 123.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 122.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 122.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 122.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 121.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 121.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 121.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 121.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 120.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 120.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 120.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 119.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 119.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 118.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 118.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 118.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 118.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 117.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 117.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 117.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 117.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 116.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 116.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 116.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 115.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 115.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 114.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 114.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 113.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 113.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 113.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 112.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 112.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 111.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 111.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 111.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 111.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 110.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 110.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 110.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 110.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 109.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 108.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 108.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 106.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 106.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 105.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 104.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 104.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 103.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 102.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 102.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 101.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 101.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 99.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 97.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 97.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 97.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 96.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 95.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 95.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 94.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 94.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 93.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 93.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 93.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 92.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 91.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 91.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 90.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 89.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 87.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 79.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 78.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 67.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 64.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 571.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 571.5
FF:10164-103B2 76 years, female 571.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 197.0
Pig sample Sample description nTPM
Caudate
nTPM: 197.0
Samples: 4

Max nTPM: 228.1
Min nTPM: 180.3
Sample A Female 180.3
Sample B Female 192.4
Sample C Male 228.1
Sample D Male 187.1

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