COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.0 nTPM
HPA:12.3 nTPM
GTEx:24.0 nTPM
FANTOM5:47.0 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA052667
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 12.3
overview
Male, age 54 		Colon sample 67
nTPM: 11.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 10.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 18.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 11
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 15.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 10.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 21.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 24.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 12.0
Samples: 373

Max nTPM: 51.6
Min nTPM: 3.3
Std nTPM: 6.2
Median nTPM: 10.6
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 51.6
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 50.1
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 41.5
GTEX-13113-1426-SM-5EGHU 60-69 years, female 37.9
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 36.5
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 35.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 34.6
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 33.6
GTEX-1C64O-2426-SM-7P8R3 60-69 years, male 30.8
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 29.8
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 29.6
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Colon - Transverse
Average nTPM: 24.0
Samples: 406

Max nTPM: 66.8
Min nTPM: 2.7
Std nTPM: 13.7
Median nTPM: 20.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 66.8
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 61.8
GTEX-1N2DV-1426-SM-DPRYQ 40-49 years, male 60.3
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 57.6
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 56.4
GTEX-1JKYN-2326-SM-CGQG7 30-39 years, male 56.0
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 55.9
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 54.9
GTEX-R55D-1826-SM-48FEF 50-59 years, male 54.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 53.7
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 53.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 47.0
FF:10014-101C5 62,83,84 years, mixed 47.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.