HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.6 nTPM
HPA:18.6 nTPM
GTEx:17.7 nTPM
FANTOM5:89.2 Scaled Tags Per Million
Pig:51.7 nTPM
Mouse:145.0 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010574
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.6
Sample id Sample description nTPM
Hippocampus
nTPM: 2.7
1898 Male, age 80, left hemisphere 14.1
2621 Female, age 67, right hemisphere 2.3
1855 Male, age 76, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 4.2
1927 Female, age 91, both hemispheres 16.7
2010 Male, age 76, both hemispheres 4.5
2246 Female, age 85, both hemispheres 2.6
2531 Female, age 67, both hemispheres 1.7
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 6.3
1938 Female, age 85, left hemisphere 12.6
2613 Female, age 94, left hemisphere 10.5
2764 Male, age 80, right hemisphere 8.1
1787 Male, age 76, left hemisphere 6.9
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 5.1
2749 Male, age 80, left hemisphere 15.4
2045 Male, age 76, both hemispheres 6.3
1873 Female, age 85, both hemispheres 3.9
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 4.1
1892 Male, age 76, both hemispheres 16.5
2437 Female, age 94, left hemisphere 4.7
1963 Male, age 80, left hemisphere 3.4
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 4.6
2137 Male, age 80, left hemisphere 9.5
2620 Female, age 94, left hemisphere 8.4
1867 Male, age 76, both hemispheres 6.8
1891 Female, age 85, both hemispheres 1.5
2436 Male, age 74, both hemispheres 1.3
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 7.5
1850 Male, age 80, both hemispheres 20.4
1990 Female, age 91, right hemisphere 14.3
2693 Female, age 94, both hemispheres 9.8
2250 Female, age 67, right hemisphere 8.6
2245 Female, age 91, both hemispheres 7.6
2532 Female, age 72, left hemisphere 7.1
1933 Female, age 85, both hemispheres 6.9
2018 Male, age 76, both hemispheres 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 18.6
1847 Female, age 91, left hemisphere 30.1
1841 Female, age 85, right hemisphere 21.3
1794 Male, age 80, right hemisphere 17.4
2521 Female, age 94, right hemisphere 14.3
2848 Male, age 76, right hemisphere 10.0
Subiculum
nTPM: 2.4
2438 Female, age 94, left hemisphere 6.7
1901 Male, age 80, both hemispheres 4.2
1977 Female, age 85, both hemispheres 3.5
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.7
Samples: 197

Max nTPM: 63.8
Min nTPM: 0.1
Std nTPM: 13.9
Median nTPM: 15.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 63.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 53.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 50.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 50.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 48.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 46.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 45.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 44.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 44.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.2
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 37.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.7
Samples: 4

Max nTPM: 64.8
Min nTPM: 42.4
Sample A Female 64.8
Sample B Female 53.4
Sample C Male 46.3
Sample D Male 42.4
Entorhinal cortex
nTPM: 47.2
Samples: 4

Max nTPM: 53.3
Min nTPM: 39.5
Sample A Female 53.3
Sample B Female 51.6
Sample C Male 44.4
Sample D Male 39.5
Subiculum
nTPM: 48.2
Samples: 4

Max nTPM: 59.0
Min nTPM: 41.1
Sample A Female 59.0
Sample B Female 41.1
Sample C Male 48.2
Sample D Male 44.3
Ventral hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 72.3
Min nTPM: 39.0
Sample A Female 72.3
Sample B Female 39.0
Sample C Male 50.2
Sample D Male 44.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 145.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 145.0
Samples: 4

Max nTPM: 167.5
Min nTPM: 124.1
Sample A Male 133.4
Sample B Male 154.8
Sample C Female 124.1
Sample D Female 167.5
Hippocampal formation
nTPM: 89.3
Samples: 4

Max nTPM: 100.4
Min nTPM: 81.0
Sample A Male 100.4
Sample B Male 92.6
Sample C Female 81.0
Sample D Female 83.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
2651 Antisense, RP_Baylor_103055, Mouse strain C57BL/6J (56 days, male) 5.1
2652 Antisense, RP_Baylor_103055, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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