We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA016970
Pigment epithelial cells
Not detected
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA074677
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 2138.9
Min nTPM: 453.1
Std nTPM: 327.3
Median nTPM:
316_1
62 years, male
2138.9
217_1
76 years, male
1990.9
480_1
63 years, male
1763.9
375_1
74 years, female
1738.4
405_1
91 years, male
1722.5
466_1
57 years, female
1648.5
43_1
64 years, female
1610.3
229_1
69 years, female
1582.2
352_1
62 years, male
1558.0
386_1
76 years, male
1533.8
526_1
61 years, male
1524.2
286_1
68 years, female
1510.4
499_1
55 years, female
1486.8
142_1
61 years, female
1469.3
319_1
81 years, male
1467.2
447_1
81 years, male
1460.6
415_1
77 years, female
1458.9
318_1
68 years, male
1443.5
35_1
74 years, female
1425.7
324_1
76 years, male
1412.5
396_1
62 years, male
1405.5
6_1
73 years, female
1405.2
322_1
76 years, male
1390.0
237_1
82 years, male
1377.2
518_1
75 years, female
1366.7
355_1
70 years, female
1364.2
246_1
77 years, male
1346.8
404_1
82 years, female
1342.9
218_1
71 years, female
1334.1
389_1
86 years, female
1327.5
376_1
75 years, female
1313.3
320_1
89 years, female
1309.0
81_1
67 years, male
1303.1
172_1
72 years, female
1295.2
348_1
84 years, male
1282.3
265_1
87 years, male
1263.5
153_1
70 years, female
1253.0
468_1
89 years, male
1234.8
425_1
59 years, female
1232.8
149_1
88 years, male
1230.8
379_1
60 years, male
1225.2
354_1
81 years, female
1222.6
347_1
72 years, male
1222.3
32_1
67 years, male
1221.1
291_1
76 years, male
1190.5
266_1
85 years, male
1174.5
126_1
63 years, male
1163.3
377_1
82 years, female
1144.2
251_1
78 years, male
1140.2
292_1
71 years, male
1131.4
406_1
79 years, male
1105.3
243_1
75 years, male
1102.6
321_1
62 years, female
1097.6
490_1
67 years, female
1091.1
503_1
68 years, male
1077.8
394_1
75 years, female
1074.6
9_1
66 years, female
1060.9
350_1
84 years, female
1059.5
384_1
83 years, male
1031.8
145_1
84 years, male
1031.4
335_1
73 years, female
1022.5
353_1
82 years, female
1008.3
163_1
78 years, male
1005.8
517_1
88 years, male
1003.0
162_1
79 years, female
996.2
139_1
64 years, female
995.9
413_1
59 years, female
963.2
18_1
88 years, male
957.6
177_1
74 years, male
953.6
356_1
87 years, female
940.6
115_1
83 years, male
939.5
288_1
66 years, female
929.1
307_1
66 years, female
927.8
117_1
61 years, male
903.8
414_1
84 years, female
890.0
313_1
79 years, female
889.9
17_1
71 years, male
883.2
495_1
57 years, female
871.0
349_1
83 years, male
864.6
311_1
78 years, male
848.1
4_1
88 years, female
846.4
254_1
77 years, female
838.1
173_1
67 years, male
815.2
264_1
73 years, female
797.5
315_1
62 years, female
796.3
506_1
65 years, male
790.2
120_1
70 years, female
787.5
2_1
77 years, female
780.5
314_1
67 years, male
770.4
295_1
61 years, female
766.6
189_1
76 years, male
753.9
109_1
81 years, female
744.2
501_1
88 years, male
726.2
42_1
85 years, male
720.4
317_1
60 years, male
717.4
308_1
70 years, female
713.4
119_1
70 years, female
692.4
491_1
89 years, female
677.4
293_1
68 years, female
664.5
99_1
64 years, male
663.5
137_1
83 years, male
655.1
89_1
63 years, male
649.9
351_1
91 years, male
557.4
41_1
94 years, female
487.0
452_1
88 years, female
453.1
Show allShow less
RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.