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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:143.2 nTPM
FANTOM5:143.5 Scaled Tags Per Million
Pig:104.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA022034Antibody HPA022901
Glial cells Not detectedLow
Neuronal cells LowLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 143.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 143.2
Samples: 246

Max nTPM: 233.2
Min nTPM: 79.9
Std nTPM: 26.9
Median nTPM: 139.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 233.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 231.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 226.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 222.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 216.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 216.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 215.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 201.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 199.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 198.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 197.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 196.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 196.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 192.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 191.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 189.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 189.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 188.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 188.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 181.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 180.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 180.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 179.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 179.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 178.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 178.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 175.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 174.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 173.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 173.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 173.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 172.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 172.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 172.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 169.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 169.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 168.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 168.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 167.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 166.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 166.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 165.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 165.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 165.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 164.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 163.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 163.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 162.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 161.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 161.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 161.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 160.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 159.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 159.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 159.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 158.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 157.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 157.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 157.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 157.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 156.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 155.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 154.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 153.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 153.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 153.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 152.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 152.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 152.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 152.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 152.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 151.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 151.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 150.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 150.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 150.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 149.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 148.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 148.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 148.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 148.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 147.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 147.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 147.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 147.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 146.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 145.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 145.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 145.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 145.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 144.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 144.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 143.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 143.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 143.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 143.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 143.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 143.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 142.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 142.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 142.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 142.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 141.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 141.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 141.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 141.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 140.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 140.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 140.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 140.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 139.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 139.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 139.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 138.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 138.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 138.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 138.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 137.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 137.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 137.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 137.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 137.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 136.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 136.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 136.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 136.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 136.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 136.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 136.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 136.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 135.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 134.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 134.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 134.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 134.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 134.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 133.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 133.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 133.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 132.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 132.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 131.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 131.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 131.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 131.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 131.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 131.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 131.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 131.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 131.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 130.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 129.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 129.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 129.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 129.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 128.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 127.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 127.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 127.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 126.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 126.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 126.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 125.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 124.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 124.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 124.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 123.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 123.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 123.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 123.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 122.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 122.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 121.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 120.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 120.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 120.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 119.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 118.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 118.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 118.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 118.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 117.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 116.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 115.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 115.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 115.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 114.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 114.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 114.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 113.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 113.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 113.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 112.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 112.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 112.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 111.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 111.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 111.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 110.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 110.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 110.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 108.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 105.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 103.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 103.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 101.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 100.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 99.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 99.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 99.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 94.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 93.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 86.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 79.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 143.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 143.5
FF:10164-103B2 76 years, female 143.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 104.4
Pig sample Sample description nTPM
Caudate
nTPM: 104.4
Samples: 4

Max nTPM: 133.8
Min nTPM: 68.7
Sample A Female 68.7
Sample B Female 107.1
Sample C Male 133.8
Sample D Male 108.0

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