COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:6.5 nTPM
HPA:3.2 nTPM
GTEx:6.5 nTPM
FANTOM5:36.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 3.2
overview
Male, age 54 		Colon sample 67
nTPM: 4.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 0.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 6.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 4.0
Samples: 373

Max nTPM: 134.7
Min nTPM: 0.0
Std nTPM: 11.4
Median nTPM: 0.6
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 134.7
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 83.0
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 64.1
GTEX-1CAMS-2626-SM-7PBY3 40-49 years, female 57.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 52.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 50.8
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 49.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 43.1
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 33.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 31.8
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 29.2
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Colon - Transverse
Average nTPM: 6.5
Samples: 406

Max nTPM: 211.3
Min nTPM: 0.0
Std nTPM: 19.6
Median nTPM: 1.2
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 211.3
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 157.4
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 151.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 129.7
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 129.3
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 90.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 80.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 70.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 50.4
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 50.0
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 40.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 36.9
FF:10014-101C5 62,83,84 years, mixed 36.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.