HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:34.9 nTPM
FANTOM5:140.3 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:23.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039053Antibody HPA039054
Glial cells Not detectedNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
1898 Male, age 80, left hemisphere 39.4
1855 Male, age 76, left hemisphere 34.5
2148 Female, age 91, left hemisphere 34.4
1911 Female, age 85, right hemisphere 34.3
2529 Female, age 94, left hemisphere 33.1
2621 Female, age 67, right hemisphere 31.5
Dentate gyrus
nTPM: 34.0
2010 Male, age 76, both hemispheres 36.4
2528 Male, age 74, both hemispheres 35.4
1927 Female, age 91, both hemispheres 34.3
2530 Female, age 94, left hemisphere 33.4
2246 Female, age 85, both hemispheres 32.9
2531 Female, age 67, both hemispheres 31.9
Entorhinal gyrus
nTPM: 33.2
2117 Female, age 91, right hemisphere 36.3
1938 Female, age 85, left hemisphere 34.3
2686 Male, age 75, right hemisphere 33.5
1787 Male, age 76, left hemisphere 32.4
2764 Male, age 80, right hemisphere 31.7
2613 Female, age 94, left hemisphere 31.1
Hippocampus, CA1
nTPM: 35.3
2749 Male, age 80, left hemisphere 39.5
1873 Female, age 85, both hemispheres 35.8
2527 Male, age 74, both hemispheres 35.3
2082 Female, age 91, right hemisphere 34.2
2045 Male, age 76, both hemispheres 31.6
Hippocampus, CA2
nTPM: 34.7
2249 Male, age 74, both hemispheres 38.8
1963 Male, age 80, left hemisphere 35.7
1940 Female, age 85, left hemisphere 34.3
2113 Female, age 91, right hemisphere 34.1
1892 Male, age 76, both hemispheres 33.7
2437 Female, age 94, left hemisphere 31.8
Hippocampus, CA3
nTPM: 33.9
2436 Male, age 74, both hemispheres 35.8
1891 Female, age 85, both hemispheres 35.6
2137 Male, age 80, left hemisphere 35.1
1867 Male, age 76, both hemispheres 34.2
2620 Female, age 94, left hemisphere 31.5
2861 Female, age 67, both hemispheres 31.1
Parahippocampal cortex
nTPM: 32.3
1850 Male, age 80, both hemispheres 34.6
1990 Female, age 91, right hemisphere 33.5
2693 Female, age 94, both hemispheres 33.3
2692 Male, age 74, both hemispheres 33.1
2250 Female, age 67, right hemisphere 32.9
1933 Female, age 85, both hemispheres 31.9
2018 Male, age 76, both hemispheres 31.8
2245 Female, age 91, both hemispheres 31.6
2532 Female, age 72, left hemisphere 31.0
2622 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 32.2
2521 Female, age 94, right hemisphere 34.0
1847 Female, age 91, left hemisphere 32.8
1794 Male, age 80, right hemisphere 32.3
1841 Female, age 85, right hemisphere 31.3
2848 Male, age 76, right hemisphere 30.8
Subiculum
nTPM: 33.6
1901 Male, age 80, both hemispheres 37.2
2729 Female, age 91, right hemisphere 34.6
2042 Male, age 76, both hemispheres 33.8
1977 Female, age 85, both hemispheres 33.4
2619 Male, age 74, both hemispheres 31.6
2438 Female, age 94, left hemisphere 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 70.1
Min nTPM: 18.8
Std nTPM: 9.1
Median nTPM: 33.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 70.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 64.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 61.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 58.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 57.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 56.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 54.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 53.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 51.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 140.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.3
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 137.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 23.9
Min nTPM: 13.4
Sample A Female 21.9
Sample B Female 16.7
Sample C Male 23.9
Sample D Male 13.4
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 17.5
Min nTPM: 11.6
Sample A Female 14.2
Sample B Female 17.5
Sample C Male 14.2
Sample D Male 11.6
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 15.2
Sample A Female 17.6
Sample B Female 16.5
Sample C Male 15.2
Sample D Male 16.2
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 16.2
Min nTPM: 14.4
Sample A Female 15.1
Sample B Female 14.4
Sample C Male 16.1
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.3
Sample A Male 19.4
Sample B Male 13.8
Sample C Female 14.3
Sample D Female 13.3
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 16.9
Sample A Male 16.9
Sample B Male 24.0
Sample C Female 30.1
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68193030 Antisense, RP_040825_01_G03, Mouse strain C57BL/6J (56 days, male) 1.5
70919376 Antisense, RP_050713_01_B12, Mouse strain C57BL/6J (56 days, male) 0.3

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