HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1920.3 nTPM
HPA:1920.3 nTPM
GTEx:2364.9 nTPM
FANTOM5:780.2 Scaled Tags Per Million
Pig:721.8 nTPM
Mouse:229.0 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039437Antibody CAB008364
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1920.3
Sample id Sample description nTPM
Hippocampus
nTPM: 1920.3
1898 Male, age 80, left hemisphere 1971.4
1855 Male, age 76, left hemisphere 1964.5
2621 Female, age 67, right hemisphere 1955.3
1911 Female, age 85, right hemisphere 1909.5
2529 Female, age 94, left hemisphere 1897.0
2148 Female, age 91, left hemisphere 1824.3
Dentate gyrus
nTPM: 1903.1
2530 Female, age 94, left hemisphere 1990.9
2010 Male, age 76, both hemispheres 1989.7
1927 Female, age 91, both hemispheres 1895.6
2246 Female, age 85, both hemispheres 1891.1
2531 Female, age 67, both hemispheres 1846.2
2528 Male, age 74, both hemispheres 1805.2
Entorhinal gyrus
nTPM: 1840.2
2686 Male, age 75, right hemisphere 1911.8
1787 Male, age 76, left hemisphere 1877.5
2117 Female, age 91, right hemisphere 1877.3
1938 Female, age 85, left hemisphere 1824.1
2764 Male, age 80, right hemisphere 1793.4
2613 Female, age 94, left hemisphere 1757.2
Hippocampus, CA1
nTPM: 1895.6
2045 Male, age 76, both hemispheres 2011.2
1873 Female, age 85, both hemispheres 1925.5
2749 Male, age 80, left hemisphere 1856.2
2082 Female, age 91, right hemisphere 1847.4
2527 Male, age 74, both hemispheres 1837.8
Hippocampus, CA2
nTPM: 1911.5
1892 Male, age 76, both hemispheres 2020.5
1940 Female, age 85, left hemisphere 1930.1
1963 Male, age 80, left hemisphere 1929.2
2437 Female, age 94, left hemisphere 1871.7
2249 Male, age 74, both hemispheres 1867.6
2113 Female, age 91, right hemisphere 1850.2
Hippocampus, CA3
nTPM: 1865.5
1867 Male, age 76, both hemispheres 2054.6
1891 Female, age 85, both hemispheres 1913.0
2436 Male, age 74, both hemispheres 1834.0
2137 Male, age 80, left hemisphere 1822.1
2861 Female, age 67, both hemispheres 1821.8
2620 Female, age 94, left hemisphere 1747.7
Parahippocampal cortex
nTPM: 1834.6
2018 Male, age 76, both hemispheres 1999.8
2250 Female, age 67, right hemisphere 1850.5
1850 Male, age 80, both hemispheres 1833.8
2532 Female, age 72, left hemisphere 1832.8
2245 Female, age 91, both hemispheres 1828.8
1990 Female, age 91, right hemisphere 1824.7
2692 Male, age 74, both hemispheres 1821.9
1933 Female, age 85, both hemispheres 1820.1
2693 Female, age 94, both hemispheres 1773.3
2622 Female, age 67, right hemisphere 1760.3
Perirhinal gyrus
nTPM: 1826.2
1841 Female, age 85, right hemisphere 1854.7
1847 Female, age 91, left hemisphere 1848.5
2848 Male, age 76, right hemisphere 1819.3
2521 Female, age 94, right hemisphere 1810.8
1794 Male, age 80, right hemisphere 1797.5
Subiculum
nTPM: 1887.3
2042 Male, age 76, both hemispheres 1996.7
2438 Female, age 94, left hemisphere 1902.3
1901 Male, age 80, both hemispheres 1876.0
2729 Female, age 91, right hemisphere 1874.5
1977 Female, age 85, both hemispheres 1856.8
2619 Male, age 74, both hemispheres 1817.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2364.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2364.9
Samples: 197

Max nTPM: 5172.2
Min nTPM: 1118.9
Std nTPM: 727.3
Median nTPM: 2196.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 5172.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 4848.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 4805.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4592.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 4454.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 4180.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 4019.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 4001.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 3921.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 3913.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 3850.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 780.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 780.2
FF:10169-103B7 60 years, female 821.3
FF:10153-102I9 76 years, female 739.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 721.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 721.8
Samples: 4

Max nTPM: 986.6
Min nTPM: 473.1
Sample A Female 986.6
Sample B Female 582.5
Sample C Male 845.0
Sample D Male 473.1
Entorhinal cortex
nTPM: 565.1
Samples: 4

Max nTPM: 625.4
Min nTPM: 453.3
Sample A Female 580.8
Sample B Female 625.4
Sample C Male 600.9
Sample D Male 453.3
Subiculum
nTPM: 568.8
Samples: 4

Max nTPM: 748.0
Min nTPM: 453.7
Sample A Female 748.0
Sample B Female 511.8
Sample C Male 453.7
Sample D Male 561.5
Ventral hippocampus
nTPM: 559.6
Samples: 4

Max nTPM: 632.2
Min nTPM: 453.7
Sample A Female 585.4
Sample B Female 453.7
Sample C Male 567.0
Sample D Male 632.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 229.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 217.6
Samples: 4

Max nTPM: 239.1
Min nTPM: 202.5
Sample A Male 212.4
Sample B Male 239.1
Sample C Female 202.5
Sample D Female 216.4
Hippocampal formation
nTPM: 229.0
Samples: 4

Max nTPM: 255.5
Min nTPM: 214.1
Sample A Male 214.3
Sample B Male 214.1
Sample C Female 231.9
Sample D Female 255.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
71378554 Antisense, RP_050517_01_A10, Mouse strain C57BL/6J (56 days, male) 18.5

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