HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.6 nTPM
HPA:21.6 nTPM
GTEx:49.8 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:86.6 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034868Antibody HPA056572
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
2621 Female, age 67, right hemisphere 25.2
2529 Female, age 94, left hemisphere 24.6
2148 Female, age 91, left hemisphere 23.1
1911 Female, age 85, right hemisphere 21.9
1898 Male, age 80, left hemisphere 19.9
1855 Male, age 76, left hemisphere 14.9
Dentate gyrus
nTPM: 20.0
1927 Female, age 91, both hemispheres 24.3
2531 Female, age 67, both hemispheres 23.2
2530 Female, age 94, left hemisphere 21.5
2528 Male, age 74, both hemispheres 18.2
2010 Male, age 76, both hemispheres 16.8
2246 Female, age 85, both hemispheres 15.9
Entorhinal gyrus
nTPM: 17.8
2613 Female, age 94, left hemisphere 21.4
2686 Male, age 75, right hemisphere 20.3
2764 Male, age 80, right hemisphere 19.1
1938 Female, age 85, left hemisphere 17.3
1787 Male, age 76, left hemisphere 14.8
2117 Female, age 91, right hemisphere 13.9
Hippocampus, CA1
nTPM: 18.2
2749 Male, age 80, left hemisphere 23.9
2527 Male, age 74, both hemispheres 18.2
1873 Female, age 85, both hemispheres 18.1
2082 Female, age 91, right hemisphere 17.6
2045 Male, age 76, both hemispheres 13.3
Hippocampus, CA2
nTPM: 19.8
1963 Male, age 80, left hemisphere 32.8
2437 Female, age 94, left hemisphere 20.1
2113 Female, age 91, right hemisphere 20.0
1892 Male, age 76, both hemispheres 17.6
2249 Male, age 74, both hemispheres 15.0
1940 Female, age 85, left hemisphere 13.5
Hippocampus, CA3
nTPM: 20.7
2861 Female, age 67, both hemispheres 31.2
2137 Male, age 80, left hemisphere 23.1
2620 Female, age 94, left hemisphere 19.7
1867 Male, age 76, both hemispheres 18.3
2436 Male, age 74, both hemispheres 16.2
1891 Female, age 85, both hemispheres 15.7
Parahippocampal cortex
nTPM: 17.3
2245 Female, age 91, both hemispheres 23.5
2622 Female, age 67, right hemisphere 19.8
2250 Female, age 67, right hemisphere 18.4
2693 Female, age 94, both hemispheres 18.2
1990 Female, age 91, right hemisphere 17.0
2692 Male, age 74, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.3
2532 Female, age 72, left hemisphere 16.1
2018 Male, age 76, both hemispheres 13.6
1850 Male, age 80, both hemispheres 13.2
Perirhinal gyrus
nTPM: 16.0
2521 Female, age 94, right hemisphere 19.7
1847 Female, age 91, left hemisphere 18.8
1794 Male, age 80, right hemisphere 15.4
1841 Female, age 85, right hemisphere 13.9
2848 Male, age 76, right hemisphere 12.1
Subiculum
nTPM: 16.4
1901 Male, age 80, both hemispheres 18.0
2729 Female, age 91, right hemisphere 17.5
2438 Female, age 94, left hemisphere 16.8
2042 Male, age 76, both hemispheres 16.1
2619 Male, age 74, both hemispheres 15.6
1977 Female, age 85, both hemispheres 14.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.8
Samples: 197

Max nTPM: 143.9
Min nTPM: 17.8
Std nTPM: 18.5
Median nTPM: 48.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 143.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 109.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 109.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 101.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 100.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 85.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 85.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 84.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 83.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.2
FF:10153-102I9 76 years, female 65.3
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 45.0
Min nTPM: 27.5
Sample A Female 45.0
Sample B Female 37.0
Sample C Male 32.6
Sample D Male 27.5
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 39.1
Min nTPM: 30.2
Sample A Female 33.7
Sample B Female 33.3
Sample C Male 39.1
Sample D Male 30.2
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 35.1
Min nTPM: 22.9
Sample A Female 35.1
Sample B Female 23.7
Sample C Male 22.9
Sample D Male 23.3
Ventral hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 47.6
Min nTPM: 20.1
Sample A Female 25.9
Sample B Female 20.1
Sample C Male 33.2
Sample D Male 47.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.6
Samples: 4

Max nTPM: 92.5
Min nTPM: 81.2
Sample A Male 89.4
Sample B Male 92.5
Sample C Female 81.2
Sample D Female 83.3
Hippocampal formation
nTPM: 80.7
Samples: 4

Max nTPM: 83.3
Min nTPM: 76.8
Sample A Male 76.8
Sample B Male 83.2
Sample C Female 79.4
Sample D Female 83.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
67979028 Antisense, RP_040923_02_A09, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.