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CNDP2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:116.1 nTPM
FANTOM5:108.1 Scaled Tags Per Million
Pig:32.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA036898Antibody HPA036899Antibody CAB026196
Glial cells LowMediumHigh
Neuronal cells LowNot detectedLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 116.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 116.1
Samples: 246

Max nTPM: 254.9
Min nTPM: 66.2
Std nTPM: 27.0
Median nTPM: 112.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 254.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 213.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 210.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 203.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 197.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 177.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 174.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 172.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 169.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 166.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 165.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 163.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 162.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 161.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 159.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 157.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 156.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 156.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 156.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 155.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 154.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 152.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 151.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 149.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 148.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 147.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 146.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 145.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 143.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 143.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 143.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 141.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 141.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 140.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 140.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 138.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 138.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 137.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 136.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 136.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 135.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 134.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 134.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 133.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 133.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 132.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 131.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 131.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 131.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 131.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 130.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 130.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 129.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 129.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 129.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 128.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 128.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 128.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 128.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 127.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 127.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 127.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 127.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 127.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 126.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 126.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 126.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 126.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 125.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 125.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 124.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 124.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 123.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 123.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 123.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 123.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 122.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 122.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 121.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 121.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 120.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 119.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 119.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 119.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 118.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 118.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 117.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 117.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 116.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 116.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 116.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 116.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 115.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 115.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 115.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 115.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 115.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 115.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 114.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 114.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 114.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 114.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 113.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 113.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 112.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 112.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 112.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 112.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 112.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 111.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 111.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 110.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 110.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 109.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 109.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 109.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 109.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 109.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 109.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 108.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 108.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 107.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 106.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 106.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 106.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 105.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 105.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 104.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 104.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 103.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 103.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 103.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 102.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 102.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 102.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 102.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 102.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 101.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 101.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 101.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 100.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 100.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 100.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 99.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 99.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 99.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 98.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 98.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 97.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 97.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 97.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 97.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 97.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 97.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 96.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 96.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 96.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 96.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 96.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 95.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 95.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 94.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 94.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 94.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 94.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 93.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 92.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 92.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 91.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 91.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 91.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 91.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 89.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 89.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 89.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 89.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 88.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 88.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 87.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 87.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 87.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 86.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 86.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 86.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 85.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 85.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 83.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 83.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 83.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 82.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 82.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 82.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 81.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 79.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 79.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 78.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 78.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 77.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 77.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 73.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 108.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 108.1
FF:10164-103B2 76 years, female 108.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 32.0
Pig sample Sample description nTPM
Caudate
nTPM: 32.0
Samples: 4

Max nTPM: 37.0
Min nTPM: 25.6
Sample A Female 25.6
Sample B Female 36.3
Sample C Male 37.0
Sample D Male 29.2

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