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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:126.1 nTPM
FANTOM5:114.8 Scaled Tags Per Million
Pig:32.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA012883
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 126.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 126.1
Samples: 246

Max nTPM: 225.7
Min nTPM: 59.5
Std nTPM: 31.0
Median nTPM: 125.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 225.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 222.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 220.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 192.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 189.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 186.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 186.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 185.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 183.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 182.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 181.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 181.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 178.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 178.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 172.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 172.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 172.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 172.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 171.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 170.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 169.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 168.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 164.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 163.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 162.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 160.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 160.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 160.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 159.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 158.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 157.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 157.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 157.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 156.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 156.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 156.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 155.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 155.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 154.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 154.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 153.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 153.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 153.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 152.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 152.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 152.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 152.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 150.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 150.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 149.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 149.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 149.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 148.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 148.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 148.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 147.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 147.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 146.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 146.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 146.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 146.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 145.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 145.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 145.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 145.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 145.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 145.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 145.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 145.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 143.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 142.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 142.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 142.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 140.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 140.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 140.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 139.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 139.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 139.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 139.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 139.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 138.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 138.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 137.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 137.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 136.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 134.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 134.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 134.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 134.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 133.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 133.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 132.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 132.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 131.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 130.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 130.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 129.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 129.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 129.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 128.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 128.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 128.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 128.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 127.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 127.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 126.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 126.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 125.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 125.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 124.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 124.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 123.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 123.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 123.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 123.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 122.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 121.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 120.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 120.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 119.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 119.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 119.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 119.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 118.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 118.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 118.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 117.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 117.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 117.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 117.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 117.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 116.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 116.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 116.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 115.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 115.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 115.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 115.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 114.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 113.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 113.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 113.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 112.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 111.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 111.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 111.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 111.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 111.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 110.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 110.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 110.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 109.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 109.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 109.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 109.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 107.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 106.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 106.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 106.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 106.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 106.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 105.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 104.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 104.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 103.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 103.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 103.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 102.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 102.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 100.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 98.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 98.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 97.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 97.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 95.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 93.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 93.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 93.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 92.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 92.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 91.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 91.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 91.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 90.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 90.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 87.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 85.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 85.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 83.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 83.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 82.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 82.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 82.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 80.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 80.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 79.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 79.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 78.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 77.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 73.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 71.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 71.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 67.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 61.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 60.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 114.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 114.8
FF:10164-103B2 76 years, female 114.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 32.2
Pig sample Sample description nTPM
Caudate
nTPM: 32.2
Samples: 4

Max nTPM: 37.3
Min nTPM: 25.8
Sample A Female 25.8
Sample B Female 36.9
Sample C Male 37.3
Sample D Male 28.9

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