COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.9 nTPM
HPA:9.6 nTPM
GTEx:13.9 nTPM
FANTOM5:18.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA055972Antibody HPA055973
Endothelial cells Not detectedNot detected
Glandular cells MediumMedium
Peripheral nerve/ganglion MediumNot detected


COLON - HPA RNA-seqi
Average nTPM 9.6
overview
Male, age 54 		Colon sample 67
nTPM: 3.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 13.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 13.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 9.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 17.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 8.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.9
Samples: 373

Max nTPM: 57.6
Min nTPM: 0.9
Std nTPM: 9.8
Median nTPM: 11.1
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 57.6
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 49.7
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 47.5
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 47.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 43.7
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 43.5
GTEX-18465-2726-SM-7LT9I 50-59 years, male 43.3
GTEX-1B8L1-1926-SM-7IGND 60-69 years, male 42.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 40.9
GTEX-1HSKV-2326-SM-A9SL9 60-69 years, male 40.3
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 38.0
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Colon - Transverse
Average nTPM: 10.5
Samples: 406

Max nTPM: 57.8
Min nTPM: 0.7
Std nTPM: 9.3
Median nTPM: 7.2
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 57.8
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 56.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 46.5
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 46.3
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 40.0
GTEX-1AX9I-2626-SM-73KU5 60-69 years, male 39.5
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 39.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 38.9
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 37.7
GTEX-1S5VW-2926-SM-E9U6H 60-69 years, male 36.6
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 35.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.6
FF:10014-101C5 62,83,84 years, mixed 18.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.