We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LAMTOR5
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • LAMTOR5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:138.1 nTPM
FANTOM5:84.3 Scaled Tags Per Million
Pig:16.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006812
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 138.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.1
Samples: 246

Max nTPM: 319.8
Min nTPM: 90.2
Std nTPM: 32.7
Median nTPM: 129.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 319.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 305.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 277.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 264.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 259.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 221.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 216.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 208.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 202.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 202.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 199.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 187.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 184.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 184.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 183.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 183.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 183.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 182.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 182.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 181.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 181.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 181.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 178.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 178.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 175.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 174.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 174.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 173.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 173.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 172.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 172.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 172.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 171.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 171.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 170.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 169.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 167.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 166.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 166.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 165.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 164.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 163.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 162.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 161.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 161.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 159.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 158.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 157.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 157.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 156.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 156.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 154.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 154.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 153.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 153.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 153.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 150.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 150.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 149.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 148.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 147.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 147.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 146.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 146.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 146.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 146.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 145.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 144.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 144.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 144.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 143.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 143.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 142.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 141.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 141.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 141.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 140.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 139.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 139.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 139.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 138.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 138.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 137.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 137.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 136.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 136.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 136.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 136.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 136.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 135.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 134.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 134.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 134.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 133.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 133.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 133.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 133.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 133.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 133.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 132.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 132.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 132.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 132.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 131.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 131.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 131.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 131.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 131.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 131.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 131.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 130.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 130.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 129.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 129.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 129.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 129.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 129.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 129.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 128.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 128.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 128.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 128.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 128.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 128.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 127.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 127.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 127.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 127.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 126.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 126.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 126.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 125.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 125.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 125.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 125.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 124.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 124.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 124.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 124.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 124.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 124.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 124.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 124.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 122.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 122.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 122.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 122.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 121.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 121.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 121.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 121.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 120.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 120.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 120.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 119.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 119.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 119.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 119.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 119.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 119.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 118.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 118.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 118.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 117.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 117.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 117.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 117.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 117.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 117.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 117.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 117.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 116.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 116.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 116.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 116.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 116.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 116.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 116.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 116.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 116.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 115.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 115.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 114.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 114.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 114.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 114.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 113.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 113.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 113.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 113.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 113.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 113.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 112.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 111.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 111.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 109.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 109.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 109.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 109.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 109.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 109.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 108.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 108.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 107.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 105.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 104.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 101.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 100.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 100.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 99.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 98.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 98.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 97.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 95.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 94.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 90.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 90.2
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 84.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 84.3
FF:10164-103B2 76 years, female 84.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 16.3
Pig sample Sample description nTPM
Caudate
nTPM: 16.3
Samples: 4

Max nTPM: 17.9
Min nTPM: 14.7
Sample A Female 16.3
Sample B Female 16.2
Sample C Male 17.9
Sample D Male 14.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.