HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.5 nTPM
HPA:17.5 nTPM
GTEx:15.4 nTPM
FANTOM5:109.3 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:14.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018127Antibody HPA027887Antibody CAB012302
Glial cells Not detectedLowNot detected
Neuronal cells MediumLowLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
2529 Female, age 94, left hemisphere 23.5
2621 Female, age 67, right hemisphere 16.0
2148 Female, age 91, left hemisphere 14.2
1911 Female, age 85, right hemisphere 14.1
1855 Male, age 76, left hemisphere 12.6
1898 Male, age 80, left hemisphere 11.6
Dentate gyrus
nTPM: 13.7
2530 Female, age 94, left hemisphere 24.5
2528 Male, age 74, both hemispheres 15.0
2246 Female, age 85, both hemispheres 14.9
2531 Female, age 67, both hemispheres 11.3
2010 Male, age 76, both hemispheres 10.9
1927 Female, age 91, both hemispheres 5.8
Entorhinal gyrus
nTPM: 16.0
2686 Male, age 75, right hemisphere 23.4
2117 Female, age 91, right hemisphere 23.0
2613 Female, age 94, left hemisphere 18.2
2764 Male, age 80, right hemisphere 13.9
1938 Female, age 85, left hemisphere 9.2
1787 Male, age 76, left hemisphere 8.3
Hippocampus, CA1
nTPM: 12.1
2527 Male, age 74, both hemispheres 17.6
1873 Female, age 85, both hemispheres 13.5
2082 Female, age 91, right hemisphere 12.0
2749 Male, age 80, left hemisphere 11.7
2045 Male, age 76, both hemispheres 5.7
Hippocampus, CA2
nTPM: 12.2
2437 Female, age 94, left hemisphere 21.2
1963 Male, age 80, left hemisphere 15.8
2113 Female, age 91, right hemisphere 12.7
2249 Male, age 74, both hemispheres 11.1
1940 Female, age 85, left hemisphere 8.1
1892 Male, age 76, both hemispheres 4.2
Hippocampus, CA3
nTPM: 11.1
1891 Female, age 85, both hemispheres 18.1
2620 Female, age 94, left hemisphere 14.3
2861 Female, age 67, both hemispheres 13.2
2137 Male, age 80, left hemisphere 10.5
1867 Male, age 76, both hemispheres 5.2
2436 Male, age 74, both hemispheres 5.2
Parahippocampal cortex
nTPM: 12.1
2692 Male, age 74, both hemispheres 18.7
2622 Female, age 67, right hemisphere 14.5
2532 Female, age 72, left hemisphere 14.0
2245 Female, age 91, both hemispheres 13.7
2018 Male, age 76, both hemispheres 12.3
1990 Female, age 91, right hemisphere 10.1
2693 Female, age 94, both hemispheres 10.1
1933 Female, age 85, both hemispheres 10.0
1850 Male, age 80, both hemispheres 9.2
2250 Female, age 67, right hemisphere 7.9
Perirhinal gyrus
nTPM: 7.1
2521 Female, age 94, right hemisphere 10.9
1794 Male, age 80, right hemisphere 7.2
1841 Female, age 85, right hemisphere 7.0
2848 Male, age 76, right hemisphere 5.8
1847 Female, age 91, left hemisphere 4.7
Subiculum
nTPM: 17.5
2042 Male, age 76, both hemispheres 22.5
2438 Female, age 94, left hemisphere 20.3
1901 Male, age 80, both hemispheres 19.3
2619 Male, age 74, both hemispheres 18.4
1977 Female, age 85, both hemispheres 12.9
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 27.9
Min nTPM: 3.3
Std nTPM: 4.4
Median nTPM: 15.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 27.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 25.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 24.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 24.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 23.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 23.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.3
FF:10169-103B7 60 years, female 113.0
FF:10153-102I9 76 years, female 105.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 28.8
Min nTPM: 21.7
Sample A Female 28.8
Sample B Female 28.2
Sample C Male 27.4
Sample D Male 21.7
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 33.3
Min nTPM: 23.1
Sample A Female 33.3
Sample B Female 23.1
Sample C Male 29.6
Sample D Male 29.1
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 33.2
Min nTPM: 22.7
Sample A Female 33.2
Sample B Female 22.7
Sample C Male 27.5
Sample D Male 25.2
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 19.1
Sample A Female 19.8
Sample B Female 19.1
Sample C Male 32.0
Sample D Male 31.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.1
Sample A Male 12.7
Sample B Male 12.1
Sample C Female 12.4
Sample D Female 20.6
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 17.7
Min nTPM: 9.3
Sample A Male 9.3
Sample B Male 16.5
Sample C Female 17.7
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
74822940 Antisense, RP_060321_01_B01, Mouse strain C57BL/6J (56 days, male) 2.1
77371765 Antisense, RP_070116_01_D06, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

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