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RPS15A
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  • RPS15A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:740.7 nTPM
HPA:740.7 nTPM
GTEx:785.9 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Mouse:310.8 nTPM
Allen mouse:4.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 740.7
Sample id Sample description nTPM
Amygdala
nTPM: 740.7
2695 Female, age 67, right hemisphere 759.1
2514 Male, age 75, right hemisphere 754.9
1987 Female, age 91, left hemisphere 732.9
2517 Female, age 94, left hemisphere 728.8
2814 Male, age 76, right hemisphere 728.1
Basal amygdala
nTPM: 723.5
2609 Male, age 75, right hemisphere 740.3
2827 Female, age 67, right hemisphere 738.4
2685 Female, age 94, left hemisphere 718.0
1955 Male, age 76, both hemispheres 716.2
2110 Male, age 80, left hemisphere 714.5
2243 Female, age 91, right hemisphere 713.4
Central amygdala
nTPM: 727.4
2826 Female, age 94, left hemisphere 762.5
2515 Male, age 75, right hemisphere 740.1
1905 Male, age 76, both hemispheres 718.8
2239 Male, age 80, left hemisphere 710.6
2701 Female, age 91, right hemisphere 704.8
Corticomedial amygdala
nTPM: 724.5
2428 Male, age 75, right hemisphere 732.9
2535 Female, age 67, right hemisphere 732.5
2240 Male, age 76, both hemispheres 731.9
2242 Female, age 91, right hemisphere 723.3
2429 Female, age 94, left hemisphere 714.1
2829 Male, age 80, left hemisphere 712.1
Lateral amygdala
nTPM: 731.4
2516 Male, age 75, right hemisphere 754.5
2534 Female, age 94, left hemisphere 747.1
2830 Female, age 67, right hemisphere 745.1
2256 Male, age 80, left hemisphere 724.5
1883 Male, age 76, both hemispheres 710.0
2255 Female, age 91, right hemisphere 707.0
Stria terminalis, bed nucleus
nTPM: 710.2
1974 Female, age 91, both hemispheres 718.6
2201 Male, age 74, unknown 706.8
2486 Female, age 94, both hemispheres 705.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 785.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 785.9
Samples: 152

Max nTPM: 2481.0
Min nTPM: 372.9
Std nTPM: 351.3
Median nTPM: 700.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2481.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2427.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2190.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1907.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1730.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1689.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1596.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1579.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1427.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1355.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1344.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1280.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1254.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1196.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1149.1
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1148.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1142.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1089.1
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1081.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1047.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1011.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1000.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 997.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 995.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 978.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 962.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 959.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 949.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 947.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 945.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 939.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 916.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 912.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 911.5
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 878.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 876.5
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 867.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 862.4
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 858.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 855.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 843.6
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 843.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 836.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 823.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 807.2
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 806.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 805.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 800.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 799.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 791.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 790.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 773.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 760.3
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 760.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 759.8
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 756.2
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 756.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 753.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 752.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 751.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 746.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 743.4
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 739.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 736.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 734.6
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 734.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 731.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 731.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 726.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 715.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 714.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 709.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 709.1
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 708.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 708.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 705.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 696.4
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 695.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 694.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 681.5
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 678.6
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 677.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 676.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 675.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 674.7
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 674.6
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 667.4
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 662.1
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 661.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 655.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 650.4
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 650.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 646.5
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 643.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 641.6
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 641.4
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 638.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 637.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 635.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 635.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 628.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 627.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 620.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 617.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 616.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 615.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 613.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 610.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 601.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 600.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 598.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 596.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 588.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 582.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 580.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 580.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 574.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 573.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 571.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 571.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 568.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 565.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 562.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 540.9
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 536.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 535.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 533.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 526.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 520.7
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 519.9
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 519.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 510.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 508.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 497.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 497.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 496.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 487.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 484.1
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 483.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 477.6
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 471.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 468.4
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 465.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 462.0
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 460.6
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 413.9
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 412.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 402.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 396.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 394.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 391.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 372.9
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 18.8
FF:10151-102I7 76 years, female 18.8

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 310.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 310.8
Samples: 4

Max nTPM: 319.4
Min nTPM: 302.6
Sample A Male 302.6
Sample B Male 318.3
Sample C Female 319.4
Sample D Female 303.0

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.9
74357560 Antisense, RP_051214_01_B11, Mouse strain C57BL/6J (56 days, male) 5.2
68862012 Antisense, RP_050301_01_C11, Mouse strain C57BL/6J (56 days, male) 4.5

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