HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.8 nTPM
HPA:19.8 nTPM
GTEx:20.0 nTPM
FANTOM5:54.9 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:39.4 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.5
1855 Male, age 76, left hemisphere 22.8
1898 Male, age 80, left hemisphere 20.4
2621 Female, age 67, right hemisphere 19.4
2148 Female, age 91, left hemisphere 17.7
2529 Female, age 94, left hemisphere 15.8
1911 Female, age 85, right hemisphere 14.8
Dentate gyrus
nTPM: 18.3
2010 Male, age 76, both hemispheres 22.0
2530 Female, age 94, left hemisphere 21.8
1927 Female, age 91, both hemispheres 18.6
2528 Male, age 74, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.1
2531 Female, age 67, both hemispheres 15.1
Entorhinal gyrus
nTPM: 17.7
2613 Female, age 94, left hemisphere 19.4
2764 Male, age 80, right hemisphere 18.4
2117 Female, age 91, right hemisphere 18.2
1787 Male, age 76, left hemisphere 17.8
1938 Female, age 85, left hemisphere 16.8
2686 Male, age 75, right hemisphere 15.8
Hippocampus, CA1
nTPM: 19.8
2749 Male, age 80, left hemisphere 27.6
1873 Female, age 85, both hemispheres 20.1
2045 Male, age 76, both hemispheres 18.5
2527 Male, age 74, both hemispheres 17.0
2082 Female, age 91, right hemisphere 15.6
Hippocampus, CA2
nTPM: 18.8
1892 Male, age 76, both hemispheres 26.2
1963 Male, age 80, left hemisphere 24.5
2249 Male, age 74, both hemispheres 16.1
2437 Female, age 94, left hemisphere 16.1
2113 Female, age 91, right hemisphere 15.0
1940 Female, age 85, left hemisphere 14.8
Hippocampus, CA3
nTPM: 17.5
1867 Male, age 76, both hemispheres 19.4
2137 Male, age 80, left hemisphere 19.0
2436 Male, age 74, both hemispheres 18.5
2861 Female, age 67, both hemispheres 18.1
2620 Female, age 94, left hemisphere 15.4
1891 Female, age 85, both hemispheres 14.7
Parahippocampal cortex
nTPM: 16.4
1850 Male, age 80, both hemispheres 19.1
2245 Female, age 91, both hemispheres 16.8
2250 Female, age 67, right hemisphere 16.6
1990 Female, age 91, right hemisphere 16.4
2532 Female, age 72, left hemisphere 16.1
2692 Male, age 74, both hemispheres 16.1
2018 Male, age 76, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.7
2622 Female, age 67, right hemisphere 15.3
Perirhinal gyrus
nTPM: 18.1
1847 Female, age 91, left hemisphere 20.3
1794 Male, age 80, right hemisphere 19.8
2848 Male, age 76, right hemisphere 17.3
2521 Female, age 94, right hemisphere 16.7
1841 Female, age 85, right hemisphere 16.4
Subiculum
nTPM: 16.0
2729 Female, age 91, right hemisphere 16.8
1901 Male, age 80, both hemispheres 16.6
2438 Female, age 94, left hemisphere 15.9
2619 Male, age 74, both hemispheres 15.8
1977 Female, age 85, both hemispheres 15.7
2042 Male, age 76, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 46.8
Min nTPM: 3.9
Std nTPM: 7.5
Median nTPM: 18.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 40.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 37.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 37.0
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 36.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.9
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 38.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.0
Sample A Female 7.9
Sample B Female 5.4
Sample C Male 5.5
Sample D Male 4.0
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 7.3
Min nTPM: 4.6
Sample A Female 7.3
Sample B Female 4.9
Sample C Male 5.4
Sample D Male 4.6
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.0
Sample A Female 8.1
Sample B Female 5.0
Sample C Male 5.9
Sample D Male 5.0
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 7.5
Min nTPM: 4.4
Sample A Female 7.2
Sample B Female 4.4
Sample C Male 7.5
Sample D Male 5.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 37.7
Min nTPM: 35.1
Sample A Male 35.3
Sample B Male 35.1
Sample C Female 37.7
Sample D Female 36.7
Hippocampal formation
nTPM: 39.5
Samples: 4

Max nTPM: 41.1
Min nTPM: 38.3
Sample A Male 38.6
Sample B Male 39.8
Sample C Female 41.1
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68117992 Antisense, RP_040929_01_H11, Mouse strain C57BL/6J (56 days, male) 1.5

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