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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:174.5 nTPM
HPA:174.5 nTPM
GTEx:316.7 nTPM
FANTOM5:329.5 Scaled Tags Per Million

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 174.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 170.9
2194 Female, age 79, both hemispheres 194.4
2565 Male, age 75, midline 172.2
1981 Female, age 72, midline 171.6
2816 Male, age 47, midline 169.8
2048 Male, age 55, midline 146.8
Cervical spinal cord, dorsal horn
nTPM: 167.9
2296 Male, age 66, both hemispheres 189.9
2173 Female, age 72, unknown 181.0
2721 Male, age 90, both hemispheres 163.1
2069 Male, age 47, both hemispheres 162.3
1877 Male, age 55, unknown 156.8
2297 Male, age 75, both hemispheres 154.5
Cervical spinal cord, ventral horn
nTPM: 174.5
2820 Female, age 79, both hemispheres 189.8
2068 Male, age 55, unknown 182.0
2480 Male, age 75, both hemispheres 178.2
2295 Male, age 66, both hemispheres 167.0
2809 Male, age 90, both hemispheres 166.0
2098 Female, age 72, unknown 163.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 316.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 316.7
Samples: 159

Max nTPM: 481.0
Min nTPM: 156.9
Std nTPM: 65.2
Median nTPM: 311.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 481.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 475.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 475.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 468.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 450.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 448.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 445.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 445.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 437.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 432.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 431.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 423.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 418.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 417.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 409.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 409.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 408.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 393.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 393.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 390.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 389.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 384.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 384.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 381.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 377.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 375.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 374.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 372.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 372.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 371.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 369.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 368.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 367.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 366.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 366.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 365.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 362.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 359.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 358.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 355.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 355.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 355.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 354.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 353.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 353.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 353.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 349.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 348.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 346.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 343.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 342.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 341.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 341.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 340.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 340.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 339.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 336.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 336.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 334.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 334.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 334.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 333.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 333.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 332.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 331.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 330.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 329.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 323.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 322.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 321.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 320.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 319.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 318.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 318.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 317.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 316.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 315.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 314.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 314.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 311.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 311.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 311.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 308.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 308.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 308.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 307.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 306.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 306.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 303.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 300.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 300.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 300.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 299.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 299.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 298.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 298.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 298.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 296.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 295.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 294.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 292.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 291.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 291.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 289.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 289.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 288.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 288.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 287.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 286.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 286.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 285.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 283.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 282.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 282.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 277.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 276.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 274.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 274.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 273.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 270.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 268.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 267.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 265.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 265.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 265.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 264.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 261.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 260.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 260.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 259.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 257.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 256.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 256.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 254.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 253.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 251.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 246.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 244.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 244.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 242.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 237.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 237.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 232.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 231.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 231.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 229.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 227.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 226.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 224.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 224.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 222.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 218.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 203.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 201.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 200.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 199.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 175.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 170.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 156.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 329.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 329.5
FF:10181-103D1 60 years, female 349.2
FF:10159-103A6 76 years, female 309.9

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