HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.4 nTPM
HPA:24.4 nTPM
GTEx:22.6 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:37.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059737
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.2
1911 Female, age 85, right hemisphere 23.1
1898 Male, age 80, left hemisphere 22.6
2621 Female, age 67, right hemisphere 21.4
2148 Female, age 91, left hemisphere 20.6
2529 Female, age 94, left hemisphere 20.0
1855 Male, age 76, left hemisphere 19.2
Dentate gyrus
nTPM: 22.8
2010 Male, age 76, both hemispheres 25.5
2530 Female, age 94, left hemisphere 22.9
2246 Female, age 85, both hemispheres 22.4
2531 Female, age 67, both hemispheres 22.4
2528 Male, age 74, both hemispheres 21.9
1927 Female, age 91, both hemispheres 21.5
Entorhinal gyrus
nTPM: 23.5
2764 Male, age 80, right hemisphere 25.7
2117 Female, age 91, right hemisphere 25.6
1938 Female, age 85, left hemisphere 23.2
2613 Female, age 94, left hemisphere 22.8
1787 Male, age 76, left hemisphere 22.1
2686 Male, age 75, right hemisphere 21.6
Hippocampus, CA1
nTPM: 21.8
2749 Male, age 80, left hemisphere 23.0
2527 Male, age 74, both hemispheres 22.5
1873 Female, age 85, both hemispheres 22.0
2082 Female, age 91, right hemisphere 21.2
2045 Male, age 76, both hemispheres 20.4
Hippocampus, CA2
nTPM: 23.5
2249 Male, age 74, both hemispheres 26.1
1940 Female, age 85, left hemisphere 24.8
1963 Male, age 80, left hemisphere 24.1
2437 Female, age 94, left hemisphere 23.1
2113 Female, age 91, right hemisphere 22.1
1892 Male, age 76, both hemispheres 20.9
Hippocampus, CA3
nTPM: 21.2
1891 Female, age 85, both hemispheres 25.4
1867 Male, age 76, both hemispheres 22.6
2436 Male, age 74, both hemispheres 21.0
2137 Male, age 80, left hemisphere 20.2
2620 Female, age 94, left hemisphere 19.8
2861 Female, age 67, both hemispheres 18.4
Parahippocampal cortex
nTPM: 22.8
2532 Female, age 72, left hemisphere 25.0
1990 Female, age 91, right hemisphere 24.0
1850 Male, age 80, both hemispheres 23.8
1933 Female, age 85, both hemispheres 23.4
2018 Male, age 76, both hemispheres 22.9
2693 Female, age 94, both hemispheres 22.9
2692 Male, age 74, both hemispheres 22.8
2245 Female, age 91, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.8
2622 Female, age 67, right hemisphere 18.6
Perirhinal gyrus
nTPM: 22.9
1794 Male, age 80, right hemisphere 24.1
2521 Female, age 94, right hemisphere 23.7
1847 Female, age 91, left hemisphere 23.5
1841 Female, age 85, right hemisphere 22.6
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 24.4
2042 Male, age 76, both hemispheres 28.2
1901 Male, age 80, both hemispheres 26.7
1977 Female, age 85, both hemispheres 25.7
2438 Female, age 94, left hemisphere 22.8
2619 Male, age 74, both hemispheres 22.5
2729 Female, age 91, right hemisphere 20.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 70.6
Min nTPM: 7.2
Std nTPM: 11.3
Median nTPM: 19.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 70.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 68.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 56.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 52.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 48.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 47.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 46.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 44.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 19.4
Min nTPM: 10.2
Sample A Female 19.4
Sample B Female 12.3
Sample C Male 14.5
Sample D Male 10.2
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.1
Sample A Female 12.4
Sample B Female 12.9
Sample C Male 9.3
Sample D Male 9.1
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 12.7
Sample B Female 11.1
Sample C Male 8.2
Sample D Male 10.9
Ventral hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.7
Sample A Female 15.1
Sample B Female 9.7
Sample C Male 13.1
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 44.1
Min nTPM: 32.3
Sample A Male 38.5
Sample B Male 44.1
Sample C Female 32.3
Sample D Female 34.0
Hippocampal formation
nTPM: 28.4
Samples: 4

Max nTPM: 33.4
Min nTPM: 25.2
Sample A Male 33.4
Sample B Male 26.0
Sample C Female 25.2
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70785000 Antisense, RP_050706_01_F07, Mouse strain C57BL/6J (56 days, male) 0.2

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