COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:10.3 nTPM
FANTOM5:50.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA053099Antibody HPA058407
Endothelial cells Not detectedNot detected
Glandular cells LowMedium
Peripheral nerve/ganglion Not detectedNot detected




COLON - HPA RNA-seqi
Average nTPM 11.2
overview
Male, age 54 		Colon sample 67
nTPM: 9.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 8.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 12.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 13.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.7
Samples: 373

Max nTPM: 15.3
Min nTPM: 5.7
Std nTPM: 1.4
Median nTPM: 9.6
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 15.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 14.7
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 14.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 14.1
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 14.0
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 13.5
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 13.5
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 13.3
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 13.2
GTEX-14E1K-1626-SM-664MO 50-59 years, male 13.0
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 13.0
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Colon - Transverse
Average nTPM: 10.3
Samples: 406

Max nTPM: 16.7
Min nTPM: 6.1
Std nTPM: 1.5
Median nTPM: 10.4
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 16.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 15.5
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 14.8
GTEX-1RAZA-1726-SM-DPS13 20-29 years, male 14.2
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 14.2
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 14.0
GTEX-1NSGN-2326-SM-E9U5X 50-59 years, male 14.0
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 13.9
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 13.9
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 13.6
GTEX-16AAH-1326-SM-7KFRG 50-59 years, male 13.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 50.7
FF:10014-101C5 62,83,84 years, mixed 50.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.