HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.8 nTPM
HPA:40.8 nTPM
GTEx:46.5 nTPM
FANTOM5:85.1 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:29.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038299
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.8
Sample id Sample description nTPM
Hippocampus
nTPM: 34.7
2529 Female, age 94, left hemisphere 43.1
1911 Female, age 85, right hemisphere 39.9
1898 Male, age 80, left hemisphere 36.2
2621 Female, age 67, right hemisphere 32.0
1855 Male, age 76, left hemisphere 29.6
2148 Female, age 91, left hemisphere 27.7
Dentate gyrus
nTPM: 35.3
2530 Female, age 94, left hemisphere 49.6
2010 Male, age 76, both hemispheres 39.2
2246 Female, age 85, both hemispheres 33.1
2528 Male, age 74, both hemispheres 32.5
2531 Female, age 67, both hemispheres 29.2
1927 Female, age 91, both hemispheres 28.0
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 51.8
2764 Male, age 80, right hemisphere 47.4
1787 Male, age 76, left hemisphere 34.0
1938 Female, age 85, left hemisphere 33.8
2613 Female, age 94, left hemisphere 33.6
2686 Male, age 75, right hemisphere 26.5
Hippocampus, CA1
nTPM: 30.5
2749 Male, age 80, left hemisphere 35.3
1873 Female, age 85, both hemispheres 33.6
2527 Male, age 74, both hemispheres 33.6
2045 Male, age 76, both hemispheres 25.5
2082 Female, age 91, right hemisphere 24.5
Hippocampus, CA2
nTPM: 36.5
1963 Male, age 80, left hemisphere 44.4
2249 Male, age 74, both hemispheres 39.6
1940 Female, age 85, left hemisphere 39.1
2437 Female, age 94, left hemisphere 37.7
2113 Female, age 91, right hemisphere 30.6
1892 Male, age 76, both hemispheres 27.7
Hippocampus, CA3
nTPM: 29.8
1891 Female, age 85, both hemispheres 40.5
1867 Male, age 76, both hemispheres 31.8
2620 Female, age 94, left hemisphere 28.0
2436 Male, age 74, both hemispheres 27.9
2861 Female, age 67, both hemispheres 25.9
2137 Male, age 80, left hemisphere 25.0
Parahippocampal cortex
nTPM: 32.2
2532 Female, age 72, left hemisphere 38.8
1990 Female, age 91, right hemisphere 38.4
2692 Male, age 74, both hemispheres 37.4
1933 Female, age 85, both hemispheres 34.3
2018 Male, age 76, both hemispheres 33.5
2245 Female, age 91, both hemispheres 33.5
1850 Male, age 80, both hemispheres 29.1
2250 Female, age 67, right hemisphere 27.5
2693 Female, age 94, both hemispheres 26.3
2622 Female, age 67, right hemisphere 23.5
Perirhinal gyrus
nTPM: 27.5
2521 Female, age 94, right hemisphere 31.0
1794 Male, age 80, right hemisphere 30.1
2848 Male, age 76, right hemisphere 27.2
1841 Female, age 85, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.5
Subiculum
nTPM: 40.8
2042 Male, age 76, both hemispheres 54.4
1901 Male, age 80, both hemispheres 47.2
1977 Female, age 85, both hemispheres 43.4
2619 Male, age 74, both hemispheres 33.8
2729 Female, age 91, right hemisphere 33.4
2438 Female, age 94, left hemisphere 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.5
Samples: 197

Max nTPM: 142.6
Min nTPM: 10.6
Std nTPM: 24.0
Median nTPM: 40.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 142.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 134.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 133.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 110.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 108.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 102.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 100.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 100.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 99.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 98.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 97.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.1
FF:10153-102I9 76 years, female 91.8
FF:10169-103B7 60 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.3
Sample A Female 10.1
Sample B Female 7.7
Sample C Male 8.9
Sample D Male 7.3
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.6
Sample A Female 8.7
Sample B Female 10.5
Sample C Male 7.9
Sample D Male 7.6
Subiculum
nTPM: 8.0
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.9
Sample A Female 9.0
Sample B Female 6.9
Sample C Male 7.3
Sample D Male 8.6
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.0
Sample A Female 8.3
Sample B Female 7.0
Sample C Male 8.1
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.2
Sample A Male 29.7
Sample B Male 32.2
Sample C Female 29.0
Sample D Female 25.2
Hippocampal formation
nTPM: 29.9
Samples: 4

Max nTPM: 32.7
Min nTPM: 27.2
Sample A Male 32.7
Sample B Male 30.2
Sample C Female 27.2
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70191979 Antisense, RP_050517_01_A03, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.