HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.6 nTPM
HPA:32.6 nTPM
GTEx:47.9 nTPM
FANTOM5:94.6 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:38.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042348Antibody CAB012969
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
2529 Female, age 94, left hemisphere 33.3
1911 Female, age 85, right hemisphere 32.7
2148 Female, age 91, left hemisphere 32.2
1898 Male, age 80, left hemisphere 30.1
2621 Female, age 67, right hemisphere 29.8
1855 Male, age 76, left hemisphere 29.6
Dentate gyrus
nTPM: 29.6
2246 Female, age 85, both hemispheres 33.1
2528 Male, age 74, both hemispheres 33.0
1927 Female, age 91, both hemispheres 30.0
2010 Male, age 76, both hemispheres 27.4
2530 Female, age 94, left hemisphere 27.3
2531 Female, age 67, both hemispheres 26.4
Entorhinal gyrus
nTPM: 31.1
1938 Female, age 85, left hemisphere 35.2
2117 Female, age 91, right hemisphere 34.0
2686 Male, age 75, right hemisphere 30.3
2764 Male, age 80, right hemisphere 30.0
1787 Male, age 76, left hemisphere 29.6
2613 Female, age 94, left hemisphere 27.2
Hippocampus, CA1
nTPM: 31.2
2527 Male, age 74, both hemispheres 36.8
1873 Female, age 85, both hemispheres 31.5
2082 Female, age 91, right hemisphere 31.0
2749 Male, age 80, left hemisphere 28.6
2045 Male, age 76, both hemispheres 28.0
Hippocampus, CA2
nTPM: 30.8
2249 Male, age 74, both hemispheres 34.0
2113 Female, age 91, right hemisphere 33.1
1940 Female, age 85, left hemisphere 32.2
2437 Female, age 94, left hemisphere 29.3
1892 Male, age 76, both hemispheres 28.5
1963 Male, age 80, left hemisphere 27.9
Hippocampus, CA3
nTPM: 29.9
2436 Male, age 74, both hemispheres 33.2
1891 Female, age 85, both hemispheres 32.3
1867 Male, age 76, both hemispheres 29.3
2137 Male, age 80, left hemisphere 29.3
2620 Female, age 94, left hemisphere 27.9
2861 Female, age 67, both hemispheres 27.5
Parahippocampal cortex
nTPM: 32.6
1933 Female, age 85, both hemispheres 36.8
2250 Female, age 67, right hemisphere 35.3
2692 Male, age 74, both hemispheres 34.6
2622 Female, age 67, right hemisphere 33.4
1990 Female, age 91, right hemisphere 32.0
2245 Female, age 91, both hemispheres 32.0
2693 Female, age 94, both hemispheres 31.8
1850 Male, age 80, both hemispheres 31.0
2018 Male, age 76, both hemispheres 30.0
2532 Female, age 72, left hemisphere 29.6
Perirhinal gyrus
nTPM: 32.0
1841 Female, age 85, right hemisphere 33.8
1847 Female, age 91, left hemisphere 32.9
1794 Male, age 80, right hemisphere 32.8
2521 Female, age 94, right hemisphere 30.7
2848 Male, age 76, right hemisphere 29.8
Subiculum
nTPM: 31.7
2619 Male, age 74, both hemispheres 35.1
2729 Female, age 91, right hemisphere 34.4
1977 Female, age 85, both hemispheres 31.6
2438 Female, age 94, left hemisphere 31.5
1901 Male, age 80, both hemispheres 29.4
2042 Male, age 76, both hemispheres 28.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.9
Samples: 197

Max nTPM: 142.0
Min nTPM: 4.0
Std nTPM: 29.4
Median nTPM: 42.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 142.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 137.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 134.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 127.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 125.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 122.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 119.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 116.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 106.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 105.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 99.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.6
FF:10153-102I9 76 years, female 114.9
FF:10169-103B7 60 years, female 74.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.0
Sample A Female 13.2
Sample B Female 12.6
Sample C Male 12.1
Sample D Male 10.0
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 19.0
Sample C Male 16.3
Sample D Male 13.8
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.1
Sample A Female 15.4
Sample B Female 17.4
Sample C Male 16.8
Sample D Male 14.1
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.9
Sample A Female 9.9
Sample B Female 13.7
Sample C Male 13.2
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.7
Samples: 4

Max nTPM: 45.9
Min nTPM: 31.5
Sample A Male 40.4
Sample B Male 37.1
Sample C Female 45.9
Sample D Female 31.5
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 43.7
Min nTPM: 32.8
Sample A Male 43.7
Sample B Male 36.9
Sample C Female 32.8
Sample D Female 33.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68148695 Antisense, RP_041116_01_H09, Mouse strain C57BL/6J (56 days, male) 0.1

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