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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:45.9 nTPM
FANTOM5:68.8 Scaled Tags Per Million
Pig:24.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA010638Antibody HPA011929Antibody CAB015341
Glial cells HighNot detectedMedium
Neuronal cells High-Medium






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 45.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 45.9
Samples: 246

Max nTPM: 94.4
Min nTPM: 25.2
Std nTPM: 10.5
Median nTPM: 44.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 94.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 89.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 81.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 74.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 66.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 63.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 62.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 61.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 61.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 61.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 61.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 60.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 60.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 60.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 59.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 59.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 57.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 57.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 57.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 56.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 56.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 55.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 55.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 54.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 54.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 54.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 54.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 53.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 53.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 53.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 53.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 52.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 52.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 52.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 51.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 51.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 51.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 50.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 50.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 50.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 50.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 50.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 49.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 49.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 48.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 48.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 47.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 47.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 47.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 47.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 47.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 46.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 46.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 46.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 46.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 46.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 45.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 45.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 45.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 45.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 44.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 44.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 44.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 44.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 44.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 44.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 44.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 44.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 43.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 43.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 43.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 43.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 43.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 42.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 42.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 42.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 41.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 41.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 41.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 41.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 41.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 41.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 41.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 41.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 41.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 40.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 40.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 40.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 40.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 39.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 39.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 39.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 39.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 39.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 38.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 38.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 38.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 37.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 37.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 37.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 37.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 37.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 37.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 37.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 37.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 36.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 36.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 36.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 36.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 36.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 35.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 35.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 35.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 35.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 35.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 35.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 34.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 34.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 34.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 34.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 34.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 34.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 34.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 33.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 33.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 33.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 32.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 32.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 32.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 32.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 32.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 31.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 31.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 30.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 30.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 30.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 28.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 68.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.8
FF:10164-103B2 76 years, female 68.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 24.8
Pig sample Sample description nTPM
Caudate
nTPM: 24.8
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.3
Sample A Female 23.1
Sample B Female 25.7
Sample C Male 29.2
Sample D Male 21.3

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