HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:17.1 nTPM
FANTOM5:39.2 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:12.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB035546
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
2621 Female, age 67, right hemisphere 15.6
2148 Female, age 91, left hemisphere 15.1
2529 Female, age 94, left hemisphere 13.8
1911 Female, age 85, right hemisphere 13.2
1855 Male, age 76, left hemisphere 13.0
1898 Male, age 80, left hemisphere 13.0
Dentate gyrus
nTPM: 13.5
2531 Female, age 67, both hemispheres 16.2
2246 Female, age 85, both hemispheres 14.4
1927 Female, age 91, both hemispheres 13.4
2528 Male, age 74, both hemispheres 13.4
2010 Male, age 76, both hemispheres 13.1
2530 Female, age 94, left hemisphere 10.3
Entorhinal gyrus
nTPM: 14.4
2764 Male, age 80, right hemisphere 15.7
1938 Female, age 85, left hemisphere 15.4
1787 Male, age 76, left hemisphere 14.9
2613 Female, age 94, left hemisphere 14.7
2686 Male, age 75, right hemisphere 14.0
2117 Female, age 91, right hemisphere 12.1
Hippocampus, CA1
nTPM: 13.8
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 14.5
2045 Male, age 76, both hemispheres 13.9
2749 Male, age 80, left hemisphere 13.1
1873 Female, age 85, both hemispheres 12.4
Hippocampus, CA2
nTPM: 13.0
2249 Male, age 74, both hemispheres 14.4
1892 Male, age 76, both hemispheres 14.2
2113 Female, age 91, right hemisphere 13.3
1940 Female, age 85, left hemisphere 12.9
1963 Male, age 80, left hemisphere 11.5
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 15.1
2620 Female, age 94, left hemisphere 19.6
2436 Male, age 74, both hemispheres 15.5
2137 Male, age 80, left hemisphere 14.6
1891 Female, age 85, both hemispheres 14.2
2861 Female, age 67, both hemispheres 13.6
1867 Male, age 76, both hemispheres 13.1
Parahippocampal cortex
nTPM: 14.7
2622 Female, age 67, right hemisphere 16.6
2693 Female, age 94, both hemispheres 15.4
2245 Female, age 91, both hemispheres 15.0
1850 Male, age 80, both hemispheres 14.8
2018 Male, age 76, both hemispheres 14.4
2692 Male, age 74, both hemispheres 14.3
1990 Female, age 91, right hemisphere 14.2
1933 Female, age 85, both hemispheres 14.0
2532 Female, age 72, left hemisphere 14.0
2250 Female, age 67, right hemisphere 13.9
Perirhinal gyrus
nTPM: 14.9
1794 Male, age 80, right hemisphere 15.2
2521 Female, age 94, right hemisphere 15.0
1847 Female, age 91, left hemisphere 14.8
1841 Female, age 85, right hemisphere 14.7
2848 Male, age 76, right hemisphere 14.7
Subiculum
nTPM: 13.9
2729 Female, age 91, right hemisphere 15.9
2619 Male, age 74, both hemispheres 15.5
1977 Female, age 85, both hemispheres 14.4
2042 Male, age 76, both hemispheres 13.6
1901 Male, age 80, both hemispheres 13.5
2438 Female, age 94, left hemisphere 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.1
Samples: 197

Max nTPM: 26.7
Min nTPM: 9.4
Std nTPM: 3.0
Median nTPM: 17.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 26.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 25.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 24.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 23.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 23.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 23.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 22.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 22.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.2
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.1
Sample A Female 10.8
Sample B Female 10.1
Sample C Male 9.5
Sample D Male 9.1
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.6
Sample A Female 10.7
Sample B Female 8.6
Sample C Male 9.2
Sample D Male 8.6
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.9
Sample A Female 10.7
Sample B Female 8.4
Sample C Male 8.3
Sample D Male 7.9
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.6
Sample A Female 8.8
Sample B Female 7.6
Sample C Male 11.1
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 11.0
Sample A Male 12.6
Sample B Male 11.3
Sample C Female 12.4
Sample D Female 11.0
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 12.9
Sample C Female 12.2
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69015470 Antisense, RP_050315_01_A09, Mouse strain C57BL/6J (56 days, male) 0.7

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