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ATP5MC2
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  • ATP5MC2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:36.1 nTPM
FANTOM5:94.3 Scaled Tags Per Million
Pig:105.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051469
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 36.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 36.1
Samples: 246

Max nTPM: 136.2
Min nTPM: 12.5
Std nTPM: 19.9
Median nTPM: 28.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 136.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 103.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 90.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 87.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 83.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 82.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 80.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 80.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 78.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 72.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 72.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 71.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 71.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 70.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 70.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 70.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 68.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 68.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 66.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 64.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 64.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 60.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 60.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 58.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 58.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 58.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 56.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 54.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 53.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 53.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 51.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 51.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 50.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 47.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 47.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 46.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 46.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 46.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 45.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 45.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 45.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 43.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 43.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 42.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 42.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 41.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 40.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 40.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 39.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 38.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 37.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 37.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 37.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 36.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 36.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 35.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 35.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 34.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 32.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 32.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 32.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 31.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 31.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 31.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 31.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 30.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 30.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 29.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 29.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 29.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 29.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 28.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 28.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 28.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 27.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 27.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 27.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 27.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 26.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 26.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 26.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 26.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 25.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 25.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 25.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 25.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 25.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 25.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 24.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 24.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 24.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 24.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 24.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 23.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 23.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 23.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 23.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 23.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 23.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 23.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 23.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 23.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 23.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 23.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 22.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 22.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 22.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 22.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 22.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 22.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 22.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 22.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 21.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 21.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 21.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 21.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 21.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 21.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 21.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 21.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 21.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 20.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 20.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 20.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 20.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 20.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 20.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 20.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 20.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 20.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 20.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 20.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 20.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 20.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 20.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 19.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 19.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 19.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 19.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 18.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 18.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 18.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 18.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 18.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 18.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 18.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 18.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 18.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 17.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 17.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 17.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 16.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 16.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 16.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 16.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 16.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 16.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 16.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 16.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 16.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 15.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 15.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 15.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 15.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 14.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 13.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 94.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 94.3
FF:10164-103B2 76 years, female 94.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 105.8
Pig sample Sample description nTPM
Caudate
nTPM: 105.8
Samples: 4

Max nTPM: 122.4
Min nTPM: 90.2
Sample A Female 96.6
Sample B Female 114.0
Sample C Male 122.4
Sample D Male 90.2

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