PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:564.7 nTPM
HPA:564.7 nTPM
FANTOM5:226.6 Scaled Tags Per Million
Pig:117.2 nTPM
Mouse:205.5 nTPM
Allen mouse:1.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 564.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 503.4
2090 Male, age 80, both hemispheres 517.2
2188 Female, age 91, both hemispheres 507.4
2301 Female, age 85, both hemispheres 497.5
1984 Male, age 76, both hemispheres 491.7
Area postrema
nTPM: 562.9
2799 Male, age 61, both hemispheres 612.2
2306 Male, age 80, both hemispheres 546.8
2054 Male, age 76, both hemispheres 529.7
Cuneate nuclei
nTPM: 507.7
2376 Male, age 61, both hemispheres 515.0
2381 Male, age 80, both hemispheres 510.0
2131 Male, age 76, both hemispheres 498.0
Dorsal cochlear nucleus
nTPM: 517.3
2370 Male, age 61, both hemispheres 525.9
2378 Male, age 80, both hemispheres 520.8
2802 Male, age 74, right hemisphere 515.6
2187 Female, age 91, both hemispheres 515.3
2058 Male, age 76, both hemispheres 508.9
Dorsal medullary reticular nucleus
nTPM: 509.4
2040 Female, age 85, both hemispheres 523.4
2373 Male, age 61, both hemispheres 507.8
2088 Male, age 76, both hemispheres 496.9
Dorsal motor vagal complex
nTPM: 511.0
2844 Male, age 55, unknown 524.8
2000 Male, age 74, unknown 519.1
2133 Female, age 91, both hemispheres 518.4
2813 Female, age 72, unknown 515.8
2185 Male, age 76, both hemispheres 514.1
2807 Female, age 85, both hemispheres 499.8
2643 Male, age 74, both hemispheres 499.4
2797 Male, age 61, both hemispheres 496.5
Dorsal tegmental nucleus
nTPM: 531.1
2358 Male, age 61, both hemispheres 584.7
2083 Male, age 80, both hemispheres 528.4
2326 Male, age 74, both hemispheres 509.4
1936 Male, age 76, left hemisphere 502.1
Dorsolateral tegmental area
nTPM: 540.2
2337 Male, age 61, both hemispheres 619.3
2360 Male, age 74, both hemispheres 529.9
2654 Male, age 80, both hemispheres 529.2
2751 Female, age 85, both hemispheres 517.1
2141 Male, age 76, both hemispheres 505.5
Gigantocellular reticular nuclei, medullary
nTPM: 507.7
2314 Male, age 61, both hemispheres 516.5
1876 Female, age 85, both hemispheres 513.9
2462 Male, age 74, both hemispheres 506.8
2387 Female, age 91, both hemispheres 504.3
2022 Male, age 76, right hemisphere 503.4
2310 Male, age 80, both hemispheres 501.1
Gigantocellular reticular nuclei, pars
nTPM: 500.6
2084 Female, age 85, both hemispheres 506.8
2706 Male, age 80, both hemispheres 506.4
2336 Male, age 61, both hemispheres 502.3
2330 Male, age 80, both hemispheres 497.4
2168 Male, age 76, both hemispheres 489.9
Inferior olive
nTPM: 523.4
2379 Male, age 80, both hemispheres 531.4
2563 Male, age 74, both hemispheres 529.9
2178 Male, age 61, both hemispheres 527.9
2085 Female, age 85, both hemispheres 515.1
2628 Female, age 91, both hemispheres 512.7
Kolliker-Fuse nucleus
nTPM: 520.9
2315 Male, age 76, right hemisphere 538.5
2163 Male, age 80, both hemispheres 517.2
2793 Female, age 91, left hemisphere 506.9
Lateral lemniscal nuclei
nTPM: 493.9
2746 Female, age 85, left hemisphere 514.3
2169 Male, age 76, both hemispheres 493.3
2453 Male, age 74, right hemisphere 488.9
2036 Male, age 80, both hemispheres 486.7
2320 Female, age 91, left hemisphere 486.2
Lateral medullary reticular nucleus
nTPM: 528.3
2852 Male, age 80, both hemispheres 546.4
2305 Male, age 74, both hemispheres 541.3
2804 Female, age 91, both hemispheres 526.0
2374 Male, age 61, both hemispheres 525.5
2190 Female, age 85, both hemispheres 517.1
2044 Male, age 76, both hemispheres 513.3
Lateral parabrachial nucleus
nTPM: 532.8
2792 Male, age 76, both hemispheres 545.7
2790 Male, age 61, both hemispheres 543.7
2013 Male, age 80, both hemispheres 526.0
2139 Female, age 85, right hemisphere 515.6
Lateral vestibular nucleus
nTPM: 508.2
2311 Male, age 80, both hemispheres 512.3
2184 Male, age 76, both hemispheres 504.2
Locus coeruleus
nTPM: 529.7
2123 Female, age 91, both hemispheres 556.9
1980 Male, age 76, both hemispheres 544.5
2014 Male, age 55, unknown 536.1
2788 Male, age 74, unknown 534.3
2317 Female, age 72, unknown 523.8
2162 Male, age 80, both hemispheres 507.2
2720 Male, age 74, both hemispheres 505.3
Medial olivary nucleus
nTPM: 544.3
1943 Male, age 61, both hemispheres 568.3
2851 Male, age 80, both hemispheres 553.5
1962 Male, age 76, both hemispheres 528.4
2138 Female, age 91, both hemispheres 527.2
Medial parabrachial nucleus
nTPM: 519.4
2156 Male, age 61, both hemispheres 532.7
2170 Female, age 91, both hemispheres 524.7
2854 Male, age 80, both hemispheres 519.9
2786 Male, age 76, both hemispheres 515.0
2463 Female, age 85, right hemisphere 504.7
Medial periolivary nuclei
nTPM: 503.9
2791 Male, age 74, right hemisphere 526.9
2081 Male, age 80, both hemispheres 524.2
2063 Male, age 76, both hemispheres 495.4
2171 Female, age 85, both hemispheres 486.5
2458 Female, age 91, both hemispheres 486.4
Medial vestibular nucleus
nTPM: 518.6
2624 Male, age 61, both hemispheres 539.8
2801 Male, age 74, both hemispheres 524.0
2803 Female, age 91, both hemispheres 518.5
2134 Male, age 76, both hemispheres 514.3
2743 Female, age 85, both hemispheres 508.5
2093 Male, age 80, both hemispheres 506.2
Motor facial nucleus
nTPM: 501.9
2365 Male, age 74, right hemisphere 519.7
2126 Male, age 61, both hemispheres 510.0
2795 Female, age 91, both hemispheres 503.7
2062 Male, age 76, both hemispheres 499.5
2697 Female, age 85, both hemispheres 498.8
2327 Male, age 80, both hemispheres 479.6
Motor hypoglossal nucleus
nTPM: 502.0
2277 Male, age 76, both hemispheres 512.2
2132 Female, age 85, both hemispheres 505.8
2125 Female, age 91, both hemispheres 504.1
2182 Male, age 80, both hemispheres 499.3
2461 Male, age 61, both hemispheres 488.7
Motor trigeminal nucleus
nTPM: 503.6
2335 Male, age 61, both hemispheres 529.6
2309 Male, age 76, both hemispheres 501.1
2079 Male, age 80, both hemispheres 499.6
2560 Male, age 74, both hemispheres 497.9
2321 Female, age 91, both hemispheres 489.8
Nuclei of the trapezoid body
nTPM: 491.5
1983 Male, age 76, both hemispheres 506.6
2166 Male, age 80, both hemispheres 495.4
2159 Male, age 61, both hemispheres 487.8
2368 Female, age 91, both hemispheres 484.0
2735 Female, age 85, both hemispheres 483.9
Nucleus ambiguus
nTPM: 513.2
2071 Male, age 76, both hemispheres 523.1
2096 Female, age 85, both hemispheres 503.2
Nucleus cuneatus
nTPM: 518.6
2808 Female, age 85, both hemispheres 562.6
2380 Male, age 80, both hemispheres 535.4
2564 Male, age 74, both hemispheres 523.1
2562 Male, age 61, both hemispheres 500.6
2805 Female, age 91, both hemispheres 495.3
2100 Male, age 76, both hemispheres 494.4
Nucleus gracilis
nTPM: 529.4
2627 Male, age 74, both hemispheres 542.7
2382 Male, age 80, both hemispheres 529.0
2299 Female, age 85, both hemispheres 516.5
Nucleus raphe magnus
nTPM: 498.9
2051 Male, age 76, both hemispheres 525.2
2455 Male, age 74, both hemispheres 503.0
2160 Male, age 61, both hemispheres 501.8
2328 Male, age 80, both hemispheres 490.1
2459 Female, age 91, both hemispheres 487.1
2172 Female, age 85, both hemispheres 486.1
Nucleus raphe obscurus
nTPM: 530.0
2800 Male, age 61, midline 535.3
2142 Male, age 76, midline 529.7
2845 Female, age 85, midline 525.0
Nucleus raphe pallidus
nTPM: 564.7
1924 Male, age 61, midline 655.4
2183 Male, age 80, midline 523.1
2145 Male, age 76, midline 515.5
Nucleus tractus solitarii
nTPM: 511.1
2656 Male, age 76, both hemispheres 517.0
2144 Female, age 91, right hemisphere 516.3
2191 Female, age 85, both hemispheres 512.5
2307 Male, age 80, both hemispheres 498.7
Paramedian reticular nucleus
nTPM: 514.9
2052 Male, age 76, both hemispheres 521.3
2313 Male, age 61, both hemispheres 517.8
2057 Male, age 80, both hemispheres 515.2
2050 Female, age 85, both hemispheres 505.3
Parvicellular reticular nuclei
nTPM: 507.3
2119 Male, age 80, both hemispheres 532.9
2095 Male, age 76, both hemispheres 503.8
2558 Male, age 74, both hemispheres 485.2
Parvicellular reticular nuclei, medullary
nTPM: 507.5
2091 Female, age 85, both hemispheres 517.0
2189 Female, age 91, both hemispheres 509.9
2181 Male, age 80, left hemisphere 495.6
Peritrigeminal nucleus
nTPM: 531.4
2067 Female, age 85, both hemispheres 552.9
2179 Male, age 61, both hemispheres 521.8
2136 Male, age 76, both hemispheres 519.7
Pontine nuclei
nTPM: 502.7
2115 Male, age 80, left hemisphere 527.5
2109 Female, age 72, unknown 504.8
1863 Male, age 55, unknown 501.6
2727 Male, age 61, right hemisphere 501.6
2454 Male, age 74, left hemisphere 498.8
2319 Female, age 91, both hemispheres 498.3
2787 Female, age 85, both hemispheres 497.6
1968 Male, age 76, left hemisphere 491.6
Pontine raphe nucleus
nTPM: 504.1
2853 Male, age 76, midline 517.0
2122 Female, age 85, midline 491.2
Posteroventral cochlear nucleus
nTPM: 518.8
2341 Male, age 80, both hemispheres 533.3
2371 Male, age 61, both hemispheres 529.2
2135 Female, age 91, both hemispheres 517.4
2070 Male, age 76, both hemispheres 513.7
2752 Female, age 85, both hemispheres 500.2
Prepositus hypoglossal nucleus
nTPM: 511.7
2855 Female, age 85, right hemisphere 512.0
2086 Male, age 80, both hemispheres 511.4
Principal sensory trigeminal nucleus
nTPM: 499.0
2324 Male, age 76, both hemispheres 505.1
2158 Male, age 61, both hemispheres 502.8
2367 Female, age 91, left hemisphere 498.7
2008 Male, age 80, left hemisphere 489.5
Reticular pontine nucleus, caudal
nTPM: 495.0
2092 Male, age 76, both hemispheres 508.6
2559 Male, age 74, both hemispheres 504.7
2457 Female, age 91, both hemispheres 484.3
2332 Male, age 80, right hemisphere 482.4
Reticular pontine nucleus, oral
nTPM: 510.1
1939 Male, age 80, both hemispheres 534.8
2167 Male, age 76, both hemispheres 513.8
2361 Male, age 74, both hemispheres 507.5
2012 Female, age 85, both hemispheres 501.7
2366 Female, age 91, both hemispheres 492.7
Reticulotegmental nucleus
nTPM: 501.5
2333 Male, age 80, both hemispheres 508.7
2322 Female, age 91, both hemispheres 505.8
2325 Male, age 76, both hemispheres 498.9
2452 Male, age 74, both hemispheres 492.4
Spinal trigeminal nucleus, caudal
nTPM: 502.5
2390 Female, age 91, both hemispheres 514.9
2308 Male, age 80, both hemispheres 505.8
2447 Male, age 76, both hemispheres 500.9
2642 Male, age 74, both hemispheres 497.1
2312 Male, age 61, both hemispheres 494.0
Spinal trigeminal nucleus, interpolar
nTPM: 519.7
2625 Male, age 61, both hemispheres 545.4
2033 Male, age 80, both hemispheres 526.3
2386 Female, age 85, both hemispheres 512.2
2066 Male, age 76, right hemisphere 511.7
2389 Female, age 91, both hemispheres 503.1
Spinal trigeminal nucleus, oral
nTPM: 503.7
2164 Male, age 80, both hemispheres 514.4
1978 Male, age 76, both hemispheres 498.9
2737 Female, age 85, both hemispheres 497.8
Spinal vestibular nucleus
nTPM: 514.1
2796 Male, age 61, both hemispheres 545.9
2806 Female, age 85, both hemispheres 511.8
2748 Male, age 76, both hemispheres 509.9
2780 Male, age 80, both hemispheres 509.7
2384 Male, age 74, both hemispheres 504.1
2186 Female, age 91, both hemispheres 503.3
Subcoeruleus area
nTPM: 510.4
2369 Female, age 85, left hemisphere 524.4
2323 Female, age 91, left hemisphere 521.3
1958 Male, age 80, both hemispheres 510.6
2451 Male, age 74, both hemispheres 502.0
2089 Male, age 76, left hemisphere 493.8
Superior olive
nTPM: 502.3
2364 Male, age 74, right hemisphere 524.6
2020 Male, age 76, both hemispheres 502.2
2561 Female, age 91, both hemispheres 497.1
1875 Female, age 85, both hemispheres 496.2
2329 Male, age 80, right hemisphere 491.3
Superior vestibular nucleus
nTPM: 533.0
2383 Male, age 74, both hemispheres 557.7
2015 Male, age 80, both hemispheres 523.7
2061 Male, age 76, both hemispheres 517.6
Ventral medullary reticular nucleus
nTPM: 509.9
2060 Male, age 76, both hemispheres 510.3
2372 Male, age 61, both hemispheres 509.6
Ventral periolivary nuclei
nTPM: 495.8
2023 Male, age 76, both hemispheres 513.3
2794 Female, age 91, left hemisphere 496.3
2165 Male, age 80, both hemispheres 494.4
2130 Female, age 85, both hemispheres 479.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 518.2
2180 Male, age 61, both hemispheres 526.0
2118 Male, age 80, both hemispheres 524.1
2741 Female, age 85, both hemispheres 519.8
1986 Male, age 76, both hemispheres 517.2
2302 Female, age 91, both hemispheres 503.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 514.3
2359 Male, age 61, both hemispheres 563.0
2840 Female, age 85, both hemispheres 526.1
2161 Male, age 80, both hemispheres 511.6
1959 Male, age 76, both hemispheres 500.7
2449 Male, age 74, both hemispheres 494.1
2456 Female, age 91, both hemispheres 490.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 226.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 166.7
FF:10165-103B3 76 years, female 197.8
FF:10182-103D2 60 years, female 135.5
Medulla oblongata
Scaled Tags Per Million: 226.6
FF:10174-103C3 60 years, female 341.4
FF:10155-103A2 76 years, female 181.7
FF:10038-101F2 18-64 years, mixed 156.6
Pons
Scaled Tags Per Million: 90.5
FF:10033-101E6 18-54 years, mixed 90.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 117.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 117.2
Samples: 4

Max nTPM: 139.2
Min nTPM: 89.8
Sample A Female 89.8
Sample B Female 104.7
Sample C Male 134.9
Sample D Male 139.2
Pons
nTPM: 106.7
Samples: 4

Max nTPM: 126.2
Min nTPM: 86.4
Sample A Female 94.6
Sample B Female 86.4
Sample C Male 119.6
Sample D Male 126.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 205.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 205.5
Samples: 4

Max nTPM: 213.2
Min nTPM: 195.2
Sample A Male 195.2
Sample B Male 213.2
Sample C Female 206.4
Sample D Female 207.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.5
69540611 Antisense, RP_050426_02_B02, Mouse strain C57BL/6J (56 days, male) 1.7
73992715 Antisense, RP_051214_01_E07, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 1.4
69540611 Antisense, RP_050426_02_B02, Mouse strain C57BL/6J (56 days, male) 1.8
73992715 Antisense, RP_051214_01_E07, Mouse strain C57BL/6J (56 days, male) 1.1

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