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AGAP2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:122.5 nTPM
FANTOM5:10.8 Scaled Tags Per Million
Pig:212.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023474Antibody HPA075831
Glial cells Not detectedNot detected
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 122.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 122.5
Samples: 246

Max nTPM: 303.5
Min nTPM: 13.1
Std nTPM: 65.1
Median nTPM: 117.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 303.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 283.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 274.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 263.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 263.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 252.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 251.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 243.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 242.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 242.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 238.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 236.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 234.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 233.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 228.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 226.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 224.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 223.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 220.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 220.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 219.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 214.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 212.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 212.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 212.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 210.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 208.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 207.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 206.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 204.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 203.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 202.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 200.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 199.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 199.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 198.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 198.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 198.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 197.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 196.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 196.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 194.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 188.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 188.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 186.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 185.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 185.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 185.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 183.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 182.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 181.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 180.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 177.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 177.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 175.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 175.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 174.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 173.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 172.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 172.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 172.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 170.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 168.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 168.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 165.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 165.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 164.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 164.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 164.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 163.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 162.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 162.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 162.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 162.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 160.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 159.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 159.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 159.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 158.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 158.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 154.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 154.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 154.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 152.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 151.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 150.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 149.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 148.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 146.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 146.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 142.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 141.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 140.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 140.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 138.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 138.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 137.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 137.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 136.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 134.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 132.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 129.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 129.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 129.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 128.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 127.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 126.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 124.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 123.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 121.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 121.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 118.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 117.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 117.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 117.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 117.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 116.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 114.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 114.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 113.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 113.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 112.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 110.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 109.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 107.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 106.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 104.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 104.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 103.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 103.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 103.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 103.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 103.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 99.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 98.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 98.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 96.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 95.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 94.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 93.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 92.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 92.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 91.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 90.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 90.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 89.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 87.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 86.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 85.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 85.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 83.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 80.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 79.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 77.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 71.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 69.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 69.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 67.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 66.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 63.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 61.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 61.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 56.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 55.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 53.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 53.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 53.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 51.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 47.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 43.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 41.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 40.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 39.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 37.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 36.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 35.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 33.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 31.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 31.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 30.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 29.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 23.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 10.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.8
FF:10164-103B2 76 years, female 10.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 212.7
Pig sample Sample description nTPM
Caudate
nTPM: 212.7
Samples: 4

Max nTPM: 263.2
Min nTPM: 143.4
Sample A Female 143.4
Sample B Female 231.0
Sample C Male 263.2
Sample D Male 213.2

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