HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:14.7 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:21.6 nTPM
Mouse:11.4 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2621 Female, age 67, right hemisphere 12.5
1898 Male, age 80, left hemisphere 12.3
1855 Male, age 76, left hemisphere 12.2
2529 Female, age 94, left hemisphere 12.0
1911 Female, age 85, right hemisphere 11.5
2148 Female, age 91, left hemisphere 11.4
Dentate gyrus
nTPM: 11.7
1927 Female, age 91, both hemispheres 13.3
2010 Male, age 76, both hemispheres 13.0
2246 Female, age 85, both hemispheres 11.8
2528 Male, age 74, both hemispheres 11.0
2530 Female, age 94, left hemisphere 10.8
2531 Female, age 67, both hemispheres 10.7
Entorhinal gyrus
nTPM: 12.7
1787 Male, age 76, left hemisphere 13.5
2686 Male, age 75, right hemisphere 13.4
1938 Female, age 85, left hemisphere 12.9
2613 Female, age 94, left hemisphere 12.3
2764 Male, age 80, right hemisphere 12.3
2117 Female, age 91, right hemisphere 11.9
Hippocampus, CA1
nTPM: 12.7
2045 Male, age 76, both hemispheres 16.5
2749 Male, age 80, left hemisphere 12.5
1873 Female, age 85, both hemispheres 12.4
2082 Female, age 91, right hemisphere 11.5
2527 Male, age 74, both hemispheres 10.9
Hippocampus, CA2
nTPM: 12.0
1892 Male, age 76, both hemispheres 13.8
1963 Male, age 80, left hemisphere 12.0
2113 Female, age 91, right hemisphere 11.9
2249 Male, age 74, both hemispheres 11.7
1940 Female, age 85, left hemisphere 11.4
2437 Female, age 94, left hemisphere 11.1
Hippocampus, CA3
nTPM: 11.7
1867 Male, age 76, both hemispheres 13.1
2137 Male, age 80, left hemisphere 12.9
1891 Female, age 85, both hemispheres 12.0
2861 Female, age 67, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.9
2436 Male, age 74, both hemispheres 10.0
Parahippocampal cortex
nTPM: 12.4
1850 Male, age 80, both hemispheres 13.5
1933 Female, age 85, both hemispheres 12.9
2018 Male, age 76, both hemispheres 12.6
2693 Female, age 94, both hemispheres 12.6
2250 Female, age 67, right hemisphere 12.5
2622 Female, age 67, right hemisphere 12.3
1990 Female, age 91, right hemisphere 12.0
2532 Female, age 72, left hemisphere 12.0
2692 Male, age 74, both hemispheres 12.0
2245 Female, age 91, both hemispheres 11.5
Perirhinal gyrus
nTPM: 13.2
1847 Female, age 91, left hemisphere 14.1
2848 Male, age 76, right hemisphere 13.8
1841 Female, age 85, right hemisphere 13.0
1794 Male, age 80, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.5
Subiculum
nTPM: 12.5
1977 Female, age 85, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.9
2619 Male, age 74, both hemispheres 12.5
1901 Male, age 80, both hemispheres 12.4
2042 Male, age 76, both hemispheres 12.2
2729 Female, age 91, right hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 22.3
Min nTPM: 10.0
Std nTPM: 2.0
Median nTPM: 14.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 21.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 19.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 18.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10153-102I9 76 years, female 23.2
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.6
Sample A Female 19.9
Sample B Female 19.3
Sample C Male 16.6
Sample D Male 17.5
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 20.4
Sample A Female 22.9
Sample B Female 22.2
Sample C Male 20.4
Sample D Male 21.0
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.3
Sample A Female 20.7
Sample B Female 18.7
Sample C Male 18.3
Sample D Male 18.3
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 16.8
Sample A Female 17.4
Sample B Female 16.8
Sample C Male 17.1
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 12.7
Sample C Female 10.1
Sample D Female 10.9
Hippocampal formation
nTPM: 11.4
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.3
Sample A Male 11.0
Sample B Male 10.3
Sample C Female 12.7
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
68410494 Antisense, RP_041214_02_A06, Mouse strain C57BL/6J (56 days, male) 7.2

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