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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:223.8 nTPM
FANTOM5:444.5 Scaled Tags Per Million
Pig:295.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018790Antibody HPA048800
Glial cells MediumNot detected
Neuronal cells Not detectedMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 223.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 223.8
Samples: 246

Max nTPM: 451.6
Min nTPM: 87.5
Std nTPM: 68.2
Median nTPM: 219.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 451.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 404.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 396.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 391.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 358.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 357.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 354.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 352.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 351.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 344.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 342.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 338.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 335.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 334.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 333.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 333.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 332.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 330.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 327.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 326.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 326.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 325.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 324.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 322.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 321.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 316.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 315.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 311.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 311.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 309.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 309.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 306.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 303.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 302.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 301.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 300.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 300.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 299.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 298.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 296.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 290.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 290.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 290.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 287.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 287.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 286.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 284.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 283.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 280.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 280.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 279.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 278.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 277.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 276.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 276.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 275.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 275.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 271.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 271.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 271.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 270.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 270.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 270.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 269.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 266.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 264.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 264.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 263.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 263.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 263.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 262.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 260.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 259.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 259.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 258.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 258.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 258.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 258.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 258.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 257.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 254.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 254.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 253.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 253.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 252.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 251.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 250.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 248.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 247.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 245.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 245.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 244.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 243.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 243.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 243.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 242.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 241.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 241.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 240.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 240.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 238.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 238.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 238.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 238.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 237.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 237.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 237.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 236.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 236.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 233.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 232.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 228.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 228.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 228.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 228.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 227.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 227.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 225.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 224.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 223.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 223.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 220.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 219.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 219.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 219.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 218.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 218.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 218.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 217.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 217.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 217.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 215.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 213.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 210.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 208.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 206.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 206.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 206.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 205.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 205.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 205.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 204.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 203.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 202.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 201.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 200.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 200.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 199.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 198.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 198.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 198.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 197.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 196.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 196.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 196.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 195.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 194.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 194.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 192.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 190.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 189.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 188.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 188.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 187.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 187.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 186.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 185.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 184.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 183.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 182.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 181.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 181.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 181.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 179.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 177.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 177.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 176.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 176.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 173.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 172.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 172.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 171.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 171.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 171.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 169.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 168.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 167.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 166.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 165.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 164.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 163.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 163.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 162.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 160.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 159.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 156.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 156.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 155.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 155.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 155.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 154.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 154.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 154.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 152.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 151.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 149.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 147.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 146.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 144.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 143.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 143.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 142.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 139.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 139.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 130.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 130.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 129.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 129.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 128.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 128.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 127.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 126.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 126.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 126.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 126.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 125.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 124.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 123.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 120.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 119.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 119.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 117.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 116.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 110.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 110.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 107.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 99.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 87.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 444.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 444.5
FF:10164-103B2 76 years, female 444.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 295.9
Pig sample Sample description nTPM
Caudate
nTPM: 296.0
Samples: 4

Max nTPM: 353.7
Min nTPM: 227.6
Sample A Female 227.6
Sample B Female 334.3
Sample C Male 353.7
Sample D Male 268.2

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