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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:598.5 nTPM
FANTOM5:1137.0 Scaled Tags Per Million
Pig:479.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA007316Antibody HPA007571Antibody CAB008636
Glial cells HighMediumHigh
Neuronal cells LowMediumMedium






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 598.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 598.5
Samples: 246

Max nTPM: 1681.5
Min nTPM: 142.9
Std nTPM: 255.6
Median nTPM: 535.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1681.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1397.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1288.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1254.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1221.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1198.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1179.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1153.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1150.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1126.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1113.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1112.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1101.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1097.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1088.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1079.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1051.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1048.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1025.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1021.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 995.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 993.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 982.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 977.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 973.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 957.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 944.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 926.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 923.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 903.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 892.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 878.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 876.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 871.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 870.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 866.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 863.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 861.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 858.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 856.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 854.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 853.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 849.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 846.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 842.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 825.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 824.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 821.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 816.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 812.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 803.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 801.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 795.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 793.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 793.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 782.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 776.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 767.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 764.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 752.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 740.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 740.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 730.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 730.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 724.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 722.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 721.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 719.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 715.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 699.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 698.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 698.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 694.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 693.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 690.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 687.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 679.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 677.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 670.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 664.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 664.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 663.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 662.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 662.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 662.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 661.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 658.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 649.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 648.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 646.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 642.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 641.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 638.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 637.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 636.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 627.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 621.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 614.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 603.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 601.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 595.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 594.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 590.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 589.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 589.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 587.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 584.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 582.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 582.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 576.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 570.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 569.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 568.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 567.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 564.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 562.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 560.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 553.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 552.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 551.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 546.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 543.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 537.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 533.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 533.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 530.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 529.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 529.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 528.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 524.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 524.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 523.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 523.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 522.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 520.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 520.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 515.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 514.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 514.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 509.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 508.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 508.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 508.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 507.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 507.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 506.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 504.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 502.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 498.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 496.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 496.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 488.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 487.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 486.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 484.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 480.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 477.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 472.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 465.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 463.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 460.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 456.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 448.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 447.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 444.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 442.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 440.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 439.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 436.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 434.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 431.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 430.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 428.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 428.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 426.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 424.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 422.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 421.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 419.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 417.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 416.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 416.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 409.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 406.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 404.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 399.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 398.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 397.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 394.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 392.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 389.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 387.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 386.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 385.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 383.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 383.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 383.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 381.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 381.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 377.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 371.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 369.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 369.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 367.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 363.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 359.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 358.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 355.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 354.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 352.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 348.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 347.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 343.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 343.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 342.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 342.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 341.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 340.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 337.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 334.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 334.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 329.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 329.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 327.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 326.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 325.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 325.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 325.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 323.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 312.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 305.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 301.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 301.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 286.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 285.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 282.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 256.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 249.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 217.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 211.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 211.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 196.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 163.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 152.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 149.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 142.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1137.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1137.0
FF:10164-103B2 76 years, female 1137.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 479.8
Pig sample Sample description nTPM
Caudate
nTPM: 479.8
Samples: 4

Max nTPM: 633.5
Min nTPM: 339.0
Sample A Female 339.0
Sample B Female 467.6
Sample C Male 633.5
Sample D Male 479.2

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