HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.7 nTPM
HPA:7.7 nTPM
GTEx:5.5 nTPM
FANTOM5:44.8 Scaled Tags Per Million
Pig:36.2 nTPM
Mouse:8.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028355Antibody HPA028357
Glial cells MediumMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.7
Sample id Sample description nTPM
Hippocampus
nTPM: 5.0
2529 Female, age 94, left hemisphere 9.6
1911 Female, age 85, right hemisphere 5.9
1855 Male, age 76, left hemisphere 4.4
1898 Male, age 80, left hemisphere 4.2
2148 Female, age 91, left hemisphere 3.5
2621 Female, age 67, right hemisphere 2.2
Dentate gyrus
nTPM: 5.3
2246 Female, age 85, both hemispheres 7.0
2010 Male, age 76, both hemispheres 6.8
2530 Female, age 94, left hemisphere 6.4
2528 Male, age 74, both hemispheres 4.4
2531 Female, age 67, both hemispheres 4.4
1927 Female, age 91, both hemispheres 2.7
Entorhinal gyrus
nTPM: 6.8
1938 Female, age 85, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.8
2117 Female, age 91, right hemisphere 8.5
1787 Male, age 76, left hemisphere 6.1
2764 Male, age 80, right hemisphere 5.7
2613 Female, age 94, left hemisphere 2.7
Hippocampus, CA1
nTPM: 4.8
2082 Female, age 91, right hemisphere 6.9
1873 Female, age 85, both hemispheres 5.8
2045 Male, age 76, both hemispheres 5.8
2527 Male, age 74, both hemispheres 5.4
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 6.1
1940 Female, age 85, left hemisphere 8.2
2113 Female, age 91, right hemisphere 7.2
2437 Female, age 94, left hemisphere 6.0
1892 Male, age 76, both hemispheres 5.6
1963 Male, age 80, left hemisphere 5.5
2249 Male, age 74, both hemispheres 4.1
Hippocampus, CA3
nTPM: 4.8
1891 Female, age 85, both hemispheres 9.8
1867 Male, age 76, both hemispheres 5.0
2436 Male, age 74, both hemispheres 4.5
2137 Male, age 80, left hemisphere 3.9
2861 Female, age 67, both hemispheres 3.1
2620 Female, age 94, left hemisphere 2.4
Parahippocampal cortex
nTPM: 6.7
1933 Female, age 85, both hemispheres 9.0
2692 Male, age 74, both hemispheres 8.3
2018 Male, age 76, both hemispheres 8.1
1850 Male, age 80, both hemispheres 7.9
2622 Female, age 67, right hemisphere 7.7
2693 Female, age 94, both hemispheres 7.7
1990 Female, age 91, right hemisphere 6.4
2245 Female, age 91, both hemispheres 4.4
2532 Female, age 72, left hemisphere 4.4
2250 Female, age 67, right hemisphere 3.5
Perirhinal gyrus
nTPM: 6.0
1841 Female, age 85, right hemisphere 8.0
1794 Male, age 80, right hemisphere 6.7
2521 Female, age 94, right hemisphere 5.7
2848 Male, age 76, right hemisphere 5.2
1847 Female, age 91, left hemisphere 4.7
Subiculum
nTPM: 7.7
1901 Male, age 80, both hemispheres 9.9
2042 Male, age 76, both hemispheres 8.4
2619 Male, age 74, both hemispheres 7.9
1977 Female, age 85, both hemispheres 7.2
2438 Female, age 94, left hemisphere 6.8
2729 Female, age 91, right hemisphere 5.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.5
Samples: 197

Max nTPM: 11.6
Min nTPM: 2.2
Std nTPM: 1.9
Median nTPM: 5.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 10.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 10.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 10.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 10.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 9.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 9.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 9.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 9.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 8.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.8
FF:10153-102I9 76 years, female 61.3
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 37.2
Min nTPM: 30.4
Sample A Female 37.2
Sample B Female 31.0
Sample C Male 37.1
Sample D Male 30.4
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 39.8
Min nTPM: 32.8
Sample A Female 35.3
Sample B Female 39.8
Sample C Male 36.0
Sample D Male 32.8
Subiculum
nTPM: 36.2
Samples: 4

Max nTPM: 46.9
Min nTPM: 30.3
Sample A Female 46.9
Sample B Female 34.3
Sample C Male 30.3
Sample D Male 33.3
Ventral hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 33.1
Min nTPM: 27.9
Sample A Female 31.8
Sample B Female 31.3
Sample C Male 27.9
Sample D Male 33.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.4
Sample A Male 7.9
Sample B Male 8.0
Sample C Female 7.4
Sample D Female 9.3
Hippocampal formation
nTPM: 6.8
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.3
Sample A Male 5.3
Sample B Male 7.7
Sample C Female 8.9
Sample D Female 5.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70218673 Antisense, RP_050519_04_H12, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.