PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:928.0 nTPM
HPA:928.0 nTPM
FANTOM5:915.9 Scaled Tags Per Million
Pig:355.5 nTPM
Mouse:290.9 nTPM
Allen mouse:15.4 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 928.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 639.8
2301 Female, age 85, both hemispheres 675.2
2090 Male, age 80, both hemispheres 661.4
1984 Male, age 76, both hemispheres 621.3
2188 Female, age 91, both hemispheres 601.2
Area postrema
nTPM: 928.0
2799 Male, age 61, both hemispheres 1213.3
2306 Male, age 80, both hemispheres 830.0
2054 Male, age 76, both hemispheres 740.6
Cuneate nuclei
nTPM: 719.4
2131 Male, age 76, both hemispheres 744.1
2376 Male, age 61, both hemispheres 716.9
2381 Male, age 80, both hemispheres 697.2
Dorsal cochlear nucleus
nTPM: 720.6
2370 Male, age 61, both hemispheres 804.7
2802 Male, age 74, right hemisphere 760.4
2378 Male, age 80, both hemispheres 686.6
2058 Male, age 76, both hemispheres 681.5
2187 Female, age 91, both hemispheres 669.7
Dorsal medullary reticular nucleus
nTPM: 725.1
2373 Male, age 61, both hemispheres 753.5
2040 Female, age 85, both hemispheres 716.1
2088 Male, age 76, both hemispheres 705.6
Dorsal motor vagal complex
nTPM: 810.1
2797 Male, age 61, both hemispheres 1026.9
2844 Male, age 55, unknown 878.6
2813 Female, age 72, unknown 838.4
2643 Male, age 74, both hemispheres 823.9
2185 Male, age 76, both hemispheres 802.7
2000 Male, age 74, unknown 769.9
2133 Female, age 91, both hemispheres 741.3
2807 Female, age 85, both hemispheres 599.0
Dorsal tegmental nucleus
nTPM: 751.8
2358 Male, age 61, both hemispheres 779.3
2326 Male, age 74, both hemispheres 749.3
1936 Male, age 76, left hemisphere 739.6
2083 Male, age 80, both hemispheres 739.1
Dorsolateral tegmental area
nTPM: 731.4
2360 Male, age 74, both hemispheres 771.2
2141 Male, age 76, both hemispheres 751.6
2654 Male, age 80, both hemispheres 728.6
2751 Female, age 85, both hemispheres 714.5
2337 Male, age 61, both hemispheres 690.8
Gigantocellular reticular nuclei, medullary
nTPM: 712.7
2314 Male, age 61, both hemispheres 789.9
2462 Male, age 74, both hemispheres 753.1
1876 Female, age 85, both hemispheres 734.3
2387 Female, age 91, both hemispheres 718.7
2022 Male, age 76, right hemisphere 662.6
2310 Male, age 80, both hemispheres 617.7
Gigantocellular reticular nuclei, pars
nTPM: 698.0
2084 Female, age 85, both hemispheres 773.4
2336 Male, age 61, both hemispheres 717.7
2330 Male, age 80, both hemispheres 683.6
2706 Male, age 80, both hemispheres 678.0
2168 Male, age 76, both hemispheres 637.4
Inferior olive
nTPM: 925.1
2563 Male, age 74, both hemispheres 1000.8
2085 Female, age 85, both hemispheres 992.8
2379 Male, age 80, both hemispheres 924.6
2628 Female, age 91, both hemispheres 854.4
2178 Male, age 61, both hemispheres 852.9
Kolliker-Fuse nucleus
nTPM: 685.4
2163 Male, age 80, both hemispheres 717.4
2315 Male, age 76, right hemisphere 717.0
2793 Female, age 91, left hemisphere 621.9
Lateral lemniscal nuclei
nTPM: 661.9
2746 Female, age 85, left hemisphere 736.7
2453 Male, age 74, right hemisphere 687.4
2169 Male, age 76, both hemispheres 663.8
2036 Male, age 80, both hemispheres 623.9
2320 Female, age 91, left hemisphere 597.5
Lateral medullary reticular nucleus
nTPM: 825.9
2804 Female, age 91, both hemispheres 952.7
2374 Male, age 61, both hemispheres 858.6
2852 Male, age 80, both hemispheres 855.7
2305 Male, age 74, both hemispheres 829.5
2190 Female, age 85, both hemispheres 775.3
2044 Male, age 76, both hemispheres 683.5
Lateral parabrachial nucleus
nTPM: 732.8
2139 Female, age 85, right hemisphere 830.2
2013 Male, age 80, both hemispheres 725.4
2792 Male, age 76, both hemispheres 699.9
2790 Male, age 61, both hemispheres 675.7
Lateral vestibular nucleus
nTPM: 727.5
2311 Male, age 80, both hemispheres 728.2
2184 Male, age 76, both hemispheres 726.7
Locus coeruleus
nTPM: 745.3
2317 Female, age 72, unknown 819.1
1980 Male, age 76, both hemispheres 781.3
2014 Male, age 55, unknown 767.0
2123 Female, age 91, both hemispheres 734.2
2788 Male, age 74, unknown 727.1
2162 Male, age 80, both hemispheres 721.4
2720 Male, age 74, both hemispheres 667.1
Medial olivary nucleus
nTPM: 800.9
2138 Female, age 91, both hemispheres 967.9
2851 Male, age 80, both hemispheres 800.6
1943 Male, age 61, both hemispheres 728.8
1962 Male, age 76, both hemispheres 706.3
Medial parabrachial nucleus
nTPM: 706.8
2156 Male, age 61, both hemispheres 740.0
2786 Male, age 76, both hemispheres 723.0
2854 Male, age 80, both hemispheres 696.8
2170 Female, age 91, both hemispheres 692.6
2463 Female, age 85, right hemisphere 681.3
Medial periolivary nuclei
nTPM: 674.3
2791 Male, age 74, right hemisphere 773.8
2171 Female, age 85, both hemispheres 687.2
2063 Male, age 76, both hemispheres 657.6
2458 Female, age 91, both hemispheres 628.3
2081 Male, age 80, both hemispheres 624.5
Medial vestibular nucleus
nTPM: 736.4
2624 Male, age 61, both hemispheres 822.0
2801 Male, age 74, both hemispheres 767.0
2743 Female, age 85, both hemispheres 758.0
2093 Male, age 80, both hemispheres 698.0
2803 Female, age 91, both hemispheres 694.8
2134 Male, age 76, both hemispheres 678.8
Motor facial nucleus
nTPM: 681.7
2795 Female, age 91, both hemispheres 800.5
2365 Male, age 74, right hemisphere 722.7
2062 Male, age 76, both hemispheres 694.5
2126 Male, age 61, both hemispheres 683.4
2697 Female, age 85, both hemispheres 605.5
2327 Male, age 80, both hemispheres 583.8
Motor hypoglossal nucleus
nTPM: 715.2
2277 Male, age 76, both hemispheres 797.4
2461 Male, age 61, both hemispheres 787.8
2125 Female, age 91, both hemispheres 743.8
2182 Male, age 80, both hemispheres 645.6
2132 Female, age 85, both hemispheres 601.7
Motor trigeminal nucleus
nTPM: 662.9
2335 Male, age 61, both hemispheres 753.7
2309 Male, age 76, both hemispheres 680.3
2560 Male, age 74, both hemispheres 645.1
2079 Male, age 80, both hemispheres 623.0
2321 Female, age 91, both hemispheres 612.3
Nuclei of the trapezoid body
nTPM: 664.8
2368 Female, age 91, both hemispheres 714.9
1983 Male, age 76, both hemispheres 693.2
2735 Female, age 85, both hemispheres 686.0
2166 Male, age 80, both hemispheres 624.0
2159 Male, age 61, both hemispheres 606.0
Nucleus ambiguus
nTPM: 780.2
2071 Male, age 76, both hemispheres 866.0
2096 Female, age 85, both hemispheres 694.4
Nucleus cuneatus
nTPM: 785.4
2564 Male, age 74, both hemispheres 924.4
2562 Male, age 61, both hemispheres 856.0
2805 Female, age 91, both hemispheres 768.3
2380 Male, age 80, both hemispheres 761.4
2100 Male, age 76, both hemispheres 702.4
2808 Female, age 85, both hemispheres 699.6
Nucleus gracilis
nTPM: 753.9
2627 Male, age 74, both hemispheres 870.1
2299 Female, age 85, both hemispheres 706.0
2382 Male, age 80, both hemispheres 685.4
Nucleus raphe magnus
nTPM: 663.1
2051 Male, age 76, both hemispheres 766.1
2455 Male, age 74, both hemispheres 762.1
2328 Male, age 80, both hemispheres 638.7
2459 Female, age 91, both hemispheres 606.1
2160 Male, age 61, both hemispheres 603.9
2172 Female, age 85, both hemispheres 601.7
Nucleus raphe obscurus
nTPM: 750.4
2142 Male, age 76, midline 800.3
2800 Male, age 61, midline 726.1
2845 Female, age 85, midline 724.8
Nucleus raphe pallidus
nTPM: 751.4
2145 Male, age 76, midline 772.5
1924 Male, age 61, midline 771.8
2183 Male, age 80, midline 709.8
Nucleus tractus solitarii
nTPM: 702.7
2656 Male, age 76, both hemispheres 786.4
2144 Female, age 91, right hemisphere 714.8
2307 Male, age 80, both hemispheres 659.4
2191 Female, age 85, both hemispheres 650.1
Paramedian reticular nucleus
nTPM: 679.7
2313 Male, age 61, both hemispheres 731.7
2057 Male, age 80, both hemispheres 708.7
2050 Female, age 85, both hemispheres 661.6
2052 Male, age 76, both hemispheres 616.8
Parvicellular reticular nuclei
nTPM: 714.8
2119 Male, age 80, both hemispheres 764.3
2558 Male, age 74, both hemispheres 700.9
2095 Male, age 76, both hemispheres 679.1
Parvicellular reticular nuclei, medullary
nTPM: 703.9
2091 Female, age 85, both hemispheres 717.8
2181 Male, age 80, left hemisphere 703.7
2189 Female, age 91, both hemispheres 690.1
Peritrigeminal nucleus
nTPM: 773.7
2067 Female, age 85, both hemispheres 838.7
2136 Male, age 76, both hemispheres 746.8
2179 Male, age 61, both hemispheres 735.4
Pontine nuclei
nTPM: 633.9
1863 Male, age 55, unknown 701.7
1968 Male, age 76, left hemisphere 695.3
2115 Male, age 80, left hemisphere 655.6
2787 Female, age 85, both hemispheres 653.3
2109 Female, age 72, unknown 635.0
2319 Female, age 91, both hemispheres 608.8
2727 Male, age 61, right hemisphere 563.9
2454 Male, age 74, left hemisphere 557.2
Pontine raphe nucleus
nTPM: 734.6
2853 Male, age 76, midline 781.0
2122 Female, age 85, midline 688.1
Posteroventral cochlear nucleus
nTPM: 683.0
2371 Male, age 61, both hemispheres 816.5
2752 Female, age 85, both hemispheres 707.5
2070 Male, age 76, both hemispheres 696.3
2341 Male, age 80, both hemispheres 609.4
2135 Female, age 91, both hemispheres 585.5
Prepositus hypoglossal nucleus
nTPM: 740.9
2086 Male, age 80, both hemispheres 770.5
2855 Female, age 85, right hemisphere 711.3
Principal sensory trigeminal nucleus
nTPM: 647.8
2324 Male, age 76, both hemispheres 763.0
2008 Male, age 80, left hemisphere 616.4
2158 Male, age 61, both hemispheres 615.3
2367 Female, age 91, left hemisphere 596.7
Reticular pontine nucleus, caudal
nTPM: 634.9
2092 Male, age 76, both hemispheres 694.7
2457 Female, age 91, both hemispheres 620.8
2332 Male, age 80, right hemisphere 615.4
2559 Male, age 74, both hemispheres 608.5
Reticular pontine nucleus, oral
nTPM: 667.7
1939 Male, age 80, both hemispheres 749.6
2167 Male, age 76, both hemispheres 732.1
2012 Female, age 85, both hemispheres 682.6
2366 Female, age 91, both hemispheres 610.0
2361 Male, age 74, both hemispheres 564.4
Reticulotegmental nucleus
nTPM: 703.1
2333 Male, age 80, both hemispheres 738.1
2322 Female, age 91, both hemispheres 717.9
2452 Male, age 74, both hemispheres 686.9
2325 Male, age 76, both hemispheres 669.4
Spinal trigeminal nucleus, caudal
nTPM: 727.9
2642 Male, age 74, both hemispheres 760.8
2308 Male, age 80, both hemispheres 748.6
2447 Male, age 76, both hemispheres 725.4
2390 Female, age 91, both hemispheres 703.9
2312 Male, age 61, both hemispheres 700.7
Spinal trigeminal nucleus, interpolar
nTPM: 708.3
2625 Male, age 61, both hemispheres 839.1
2033 Male, age 80, both hemispheres 689.9
2386 Female, age 85, both hemispheres 688.0
2389 Female, age 91, both hemispheres 664.4
2066 Male, age 76, right hemisphere 660.3
Spinal trigeminal nucleus, oral
nTPM: 700.8
1978 Male, age 76, both hemispheres 767.6
2737 Female, age 85, both hemispheres 692.4
2164 Male, age 80, both hemispheres 642.2
Spinal vestibular nucleus
nTPM: 708.9
2796 Male, age 61, both hemispheres 784.3
2806 Female, age 85, both hemispheres 733.1
2186 Female, age 91, both hemispheres 702.6
2384 Male, age 74, both hemispheres 690.9
2780 Male, age 80, both hemispheres 689.7
2748 Male, age 76, both hemispheres 652.9
Subcoeruleus area
nTPM: 703.1
2451 Male, age 74, both hemispheres 733.8
2323 Female, age 91, left hemisphere 726.7
2369 Female, age 85, left hemisphere 704.9
1958 Male, age 80, both hemispheres 697.0
2089 Male, age 76, left hemisphere 653.1
Superior olive
nTPM: 656.2
2364 Male, age 74, right hemisphere 746.5
2020 Male, age 76, both hemispheres 649.7
2561 Female, age 91, both hemispheres 647.2
1875 Female, age 85, both hemispheres 623.3
2329 Male, age 80, right hemisphere 614.3
Superior vestibular nucleus
nTPM: 755.1
2383 Male, age 74, both hemispheres 794.4
2061 Male, age 76, both hemispheres 740.7
2015 Male, age 80, both hemispheres 730.4
Ventral medullary reticular nucleus
nTPM: 769.9
2372 Male, age 61, both hemispheres 854.8
2060 Male, age 76, both hemispheres 685.0
Ventral periolivary nuclei
nTPM: 668.3
2130 Female, age 85, both hemispheres 752.0
2165 Male, age 80, both hemispheres 679.5
2023 Male, age 76, both hemispheres 637.3
2794 Female, age 91, left hemisphere 604.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 764.4
2302 Female, age 91, both hemispheres 913.3
2180 Male, age 61, both hemispheres 762.0
2741 Female, age 85, both hemispheres 731.7
2118 Male, age 80, both hemispheres 714.9
1986 Male, age 76, both hemispheres 700.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 708.5
2359 Male, age 61, both hemispheres 832.3
2840 Female, age 85, both hemispheres 730.6
2449 Male, age 74, both hemispheres 696.2
2456 Female, age 91, both hemispheres 673.1
1959 Male, age 76, both hemispheres 664.0
2161 Male, age 80, both hemispheres 654.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 915.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 915.9
FF:10182-103D2 60 years, female 974.7
FF:10165-103B3 76 years, female 857.2
Medulla oblongata
Scaled Tags Per Million: 711.7
FF:10038-101F2 18-64 years, mixed 814.9
FF:10174-103C3 60 years, female 711.1
FF:10155-103A2 76 years, female 609.2
Pons
Scaled Tags Per Million: 484.4
FF:10033-101E6 18-54 years, mixed 484.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 355.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 291.1
Samples: 4

Max nTPM: 335.1
Min nTPM: 230.0
Sample A Female 287.5
Sample B Female 230.0
Sample C Male 311.6
Sample D Male 335.1
Pons
nTPM: 355.5
Samples: 4

Max nTPM: 634.8
Min nTPM: 224.4
Sample A Female 634.8
Sample B Female 224.4
Sample C Male 267.7
Sample D Male 295.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 290.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 290.9
Samples: 4

Max nTPM: 323.3
Min nTPM: 275.1
Sample A Male 323.3
Sample B Male 275.5
Sample C Female 289.5
Sample D Female 275.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.8
67936207 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 18.6
68196976 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 11.8
77414652 Antisense, RP_070205_01_H10, Mouse strain C57BL/6J (56 days, male) 11.1
Pons
Expression energy: 15.4
67936207 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 18.2
68196976 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 12.8
77414652 Antisense, RP_070205_01_H10, Mouse strain C57BL/6J (56 days, male) 12.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.