HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.4 nTPM
HPA:21.4 nTPM
GTEx:19.0 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:33.8 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043476Antibody HPA048479
Glial cells LowNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1898 Male, age 80, left hemisphere 22.1
2529 Female, age 94, left hemisphere 21.3
1855 Male, age 76, left hemisphere 21.2
1911 Female, age 85, right hemisphere 21.0
2621 Female, age 67, right hemisphere 20.6
2148 Female, age 91, left hemisphere 19.7
Dentate gyrus
nTPM: 20.2
2246 Female, age 85, both hemispheres 20.9
2010 Male, age 76, both hemispheres 20.8
1927 Female, age 91, both hemispheres 20.5
2530 Female, age 94, left hemisphere 19.9
2528 Male, age 74, both hemispheres 19.8
2531 Female, age 67, both hemispheres 19.5
Entorhinal gyrus
nTPM: 20.8
2764 Male, age 80, right hemisphere 21.2
1938 Female, age 85, left hemisphere 21.1
2686 Male, age 75, right hemisphere 21.1
2117 Female, age 91, right hemisphere 21.0
1787 Male, age 76, left hemisphere 20.9
2613 Female, age 94, left hemisphere 19.6
Hippocampus, CA1
nTPM: 21.1
2749 Male, age 80, left hemisphere 22.6
1873 Female, age 85, both hemispheres 21.2
2082 Female, age 91, right hemisphere 21.2
2527 Male, age 74, both hemispheres 21.0
2045 Male, age 76, both hemispheres 19.7
Hippocampus, CA2
nTPM: 21.3
1892 Male, age 76, both hemispheres 23.2
2249 Male, age 74, both hemispheres 22.3
2437 Female, age 94, left hemisphere 20.9
2113 Female, age 91, right hemisphere 20.6
1963 Male, age 80, left hemisphere 20.5
1940 Female, age 85, left hemisphere 20.3
Hippocampus, CA3
nTPM: 21.2
1891 Female, age 85, both hemispheres 22.2
1867 Male, age 76, both hemispheres 22.1
2436 Male, age 74, both hemispheres 22.1
2137 Male, age 80, left hemisphere 21.5
2620 Female, age 94, left hemisphere 19.9
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 21.2
1850 Male, age 80, both hemispheres 22.7
2245 Female, age 91, both hemispheres 21.8
1990 Female, age 91, right hemisphere 21.6
2250 Female, age 67, right hemisphere 21.5
1933 Female, age 85, both hemispheres 21.2
2532 Female, age 72, left hemisphere 21.2
2693 Female, age 94, both hemispheres 21.2
2018 Male, age 76, both hemispheres 20.5
2692 Male, age 74, both hemispheres 20.5
2622 Female, age 67, right hemisphere 20.0
Perirhinal gyrus
nTPM: 21.4
1841 Female, age 85, right hemisphere 22.1
1847 Female, age 91, left hemisphere 21.7
1794 Male, age 80, right hemisphere 21.6
2848 Male, age 76, right hemisphere 20.9
2521 Female, age 94, right hemisphere 20.8
Subiculum
nTPM: 21.1
1901 Male, age 80, both hemispheres 22.0
2438 Female, age 94, left hemisphere 22.0
1977 Female, age 85, both hemispheres 21.5
2619 Male, age 74, both hemispheres 20.9
2042 Male, age 76, both hemispheres 20.3
2729 Female, age 91, right hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 34.3
Min nTPM: 11.4
Std nTPM: 4.1
Median nTPM: 19.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 31.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 28.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 28.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 27.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 26.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.0
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 32.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 8.6
Sample C Male 9.5
Sample D Male 9.5
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.9
Sample A Female 8.7
Sample B Female 10.9
Sample C Male 7.9
Sample D Male 8.7
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.0
Sample A Female 8.9
Sample B Female 7.7
Sample C Male 7.0
Sample D Male 8.0
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.6
Sample A Female 7.7
Sample B Female 8.1
Sample C Male 7.6
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 31.4
Min nTPM: 29.1
Sample A Male 30.8
Sample B Male 31.4
Sample C Female 31.4
Sample D Female 29.1
Hippocampal formation
nTPM: 33.8
Samples: 4

Max nTPM: 36.5
Min nTPM: 32.8
Sample A Male 36.5
Sample B Male 33.0
Sample C Female 32.8
Sample D Female 33.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69169745 Antisense, RP_050321_04_B07, Mouse strain C57BL/6J (56 days, male) 2.7

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