HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.5 nTPM
HPA:22.5 nTPM
GTEx:23.6 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:23.8 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
2529 Female, age 94, left hemisphere 23.3
1911 Female, age 85, right hemisphere 22.6
1898 Male, age 80, left hemisphere 22.3
1855 Male, age 76, left hemisphere 19.5
2148 Female, age 91, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.1
Dentate gyrus
nTPM: 20.1
2530 Female, age 94, left hemisphere 22.3
2528 Male, age 74, both hemispheres 21.5
1927 Female, age 91, both hemispheres 19.9
2010 Male, age 76, both hemispheres 19.9
2246 Female, age 85, both hemispheres 19.0
2531 Female, age 67, both hemispheres 17.8
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 24.1
1787 Male, age 76, left hemisphere 22.1
2686 Male, age 75, right hemisphere 21.0
1938 Female, age 85, left hemisphere 20.8
2764 Male, age 80, right hemisphere 20.5
2613 Female, age 94, left hemisphere 19.2
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 22.6
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 20.7
2082 Female, age 91, right hemisphere 20.0
2045 Male, age 76, both hemispheres 17.1
Hippocampus, CA2
nTPM: 21.8
1892 Male, age 76, both hemispheres 23.8
1963 Male, age 80, left hemisphere 22.5
2437 Female, age 94, left hemisphere 22.1
2249 Male, age 74, both hemispheres 21.7
2113 Female, age 91, right hemisphere 21.0
1940 Female, age 85, left hemisphere 19.9
Hippocampus, CA3
nTPM: 20.5
1891 Female, age 85, both hemispheres 24.2
1867 Male, age 76, both hemispheres 22.9
2137 Male, age 80, left hemisphere 22.5
2436 Male, age 74, both hemispheres 19.8
2861 Female, age 67, both hemispheres 17.3
2620 Female, age 94, left hemisphere 16.2
Parahippocampal cortex
nTPM: 20.0
2692 Male, age 74, both hemispheres 23.3
1990 Female, age 91, right hemisphere 21.4
1850 Male, age 80, both hemispheres 21.0
2250 Female, age 67, right hemisphere 19.9
2693 Female, age 94, both hemispheres 19.9
1933 Female, age 85, both hemispheres 19.8
2245 Female, age 91, both hemispheres 19.2
2532 Female, age 72, left hemisphere 19.1
2018 Male, age 76, both hemispheres 18.7
2622 Female, age 67, right hemisphere 17.5
Perirhinal gyrus
nTPM: 19.5
2521 Female, age 94, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.7
1841 Female, age 85, right hemisphere 19.5
1847 Female, age 91, left hemisphere 19.3
2848 Male, age 76, right hemisphere 18.9
Subiculum
nTPM: 22.5
1901 Male, age 80, both hemispheres 25.2
2042 Male, age 76, both hemispheres 23.3
1977 Female, age 85, both hemispheres 22.6
2438 Female, age 94, left hemisphere 21.9
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 46.7
Min nTPM: 8.3
Std nTPM: 7.2
Median nTPM: 22.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 46.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 45.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 44.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 42.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 40.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 39.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 39.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 39.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 38.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.6
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 10.2
Sample A Female 17.1
Sample B Female 12.4
Sample C Male 16.6
Sample D Male 10.2
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.4
Sample A Female 10.3
Sample B Female 11.9
Sample C Male 11.1
Sample D Male 9.4
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.6
Sample A Female 13.4
Sample B Female 11.5
Sample C Male 11.7
Sample D Male 10.6
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.8
Sample A Female 17.0
Sample B Female 10.8
Sample C Male 17.2
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.1
Sample A Male 19.8
Sample B Male 17.6
Sample C Female 17.2
Sample D Female 16.1
Hippocampal formation
nTPM: 23.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.1
Sample A Male 22.2
Sample B Male 24.4
Sample C Female 26.5
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69289787 Antisense, RP_050407_03_H04, Mouse strain C57BL/6J (56 days, male) 3.8

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