We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ITM2B
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • ITM2B
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:301.0 nTPM
HPA:301.0 nTPM
GTEx:276.3 nTPM
FANTOM5:941.9 Scaled Tags Per Million
Pig:434.7 nTPM
Mouse:587.8 nTPM
Allen mouse:17.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029292Antibody HPA071992
Glial cells LowMedium
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 301.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 256.5
2288 Male, age 75, left hemisphere 288.0
2481 Female, age 94, left hemisphere 277.8
2846 Female, age 79, unknown 272.6
2290 Female, age 72, unknown 265.5
1857 Female, age 85, left hemisphere 258.2
1781 Male, age 74, unknown 237.0
1854 Male, age 80, left hemisphere 235.2
2289 Male, age 61, right hemisphere 217.9
Claustrum
nTPM: 238.4
1956 Male, age 74, unknown 266.1
2198 Male, age 80, both hemispheres 265.8
2196 Female, age 79, unknown 255.9
2292 Female, age 85, both hemispheres 255.2
2284 Female, age 91, both hemispheres 233.1
2568 Male, age 61, both hemispheres 227.8
2491 Male, age 75, both hemispheres 223.2
2392 Female, age 94, both hemispheres 216.8
2645 Female, age 72, unknown 201.5
Globus pallidus, externus
nTPM: 285.5
1996 Male, age 80, right hemisphere 347.2
2772 Female, age 79, unknown 344.3
2395 Male, age 75, both hemispheres 272.6
2646 Male, age 61, right hemisphere 264.6
2567 Female, age 72, unknown 198.8
Globus pallidus, internus
nTPM: 301.0
2287 Male, age 75, right hemisphere 355.7
2778 Female, age 91, both hemispheres 339.7
2037 Male, age 80, right hemisphere 331.0
1818 Male, age 74, unknown 293.2
2483 Female, age 94, right hemisphere 284.4
2111 Female, age 85, right hemisphere 263.8
2566 Female, age 72, unknown 239.6
Nucleus accumbens
nTPM: 254.3
2286 Male, age 75, left hemisphere 313.8
2391 Female, age 94, left hemisphere 274.9
2698 Female, age 72, unknown 273.3
1856 Female, age 91, right hemisphere 260.6
1806 Female, age 85, left hemisphere 244.1
2824 Male, age 61, right hemisphere 227.7
1783 Male, age 74, unknown 224.6
2732 Male, age 80, right hemisphere 215.7
Nucleus basalis of Meynert
nTPM: 258.3
2821 Male, age 75, both hemispheres 276.5
2569 Male, age 61, both hemispheres 272.7
2484 Female, age 94, left hemisphere 249.2
2393 Male, age 80, right hemisphere 234.8
Nucleus of the diagonal band
nTPM: 278.6
2029 Male, age 61, right hemisphere 295.2
2775 Male, age 80, right hemisphere 280.2
1812 Female, age 91, both hemispheres 279.0
2195 Female, age 85, both hemispheres 277.3
1979 Male, age 74, unknown 261.2
Olfactory tubercle
nTPM: 258.5
2856 Male, age 75, right hemisphere 268.5
1846 Male, age 80, right hemisphere 267.9
1998 Female, age 91, both hemispheres 251.7
2487 Female, age 94, left hemisphere 245.9
Putamen
nTPM: 243.2
2482 Female, age 94, left hemisphere 292.4
1937 Female, age 91, right hemisphere 257.1
1829 Male, age 74, unknown 243.7
2647 Male, age 75, left hemisphere 239.8
1838 Male, age 80, right hemisphere 224.9
2466 Female, age 79, unknown 224.7
2489 Female, age 72, unknown 219.4
Septal nuclei
nTPM: 252.1
2031 Female, age 72, unknown 292.4
2199 Male, age 80, right hemisphere 269.5
2629 Female, age 94, right hemisphere 267.6
1960 Male, age 74, unknown 250.7
2009 Female, age 91, both hemispheres 248.9
2059 Female, age 85, both hemispheres 224.4
2394 Male, age 61, left hemisphere 211.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 276.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 275.4
Samples: 246

Max nTPM: 607.1
Min nTPM: 187.7
Std nTPM: 48.5
Median nTPM: 267.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 607.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 431.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 410.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 406.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 397.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 383.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 381.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 378.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 377.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 375.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 374.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 374.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 363.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 357.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 351.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 349.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 347.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 343.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 343.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 342.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 341.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 339.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 338.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 337.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 336.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 335.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 332.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 332.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 331.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 331.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 330.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 330.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 330.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 325.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 325.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 324.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 322.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 322.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 319.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 317.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 316.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 314.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 311.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 310.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 309.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 306.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 306.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 304.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 304.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 304.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 303.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 301.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 301.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 301.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 300.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 300.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 300.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 299.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 298.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 298.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 297.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 297.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 297.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 295.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 294.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 294.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 293.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 292.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 292.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 292.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 291.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 290.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 290.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 290.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 290.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 290.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 289.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 288.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 288.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 287.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 287.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 287.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 285.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 285.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 284.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 283.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 283.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 282.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 282.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 281.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 280.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 280.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 279.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 278.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 278.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 278.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 278.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 277.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 276.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 276.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 275.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 275.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 275.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 275.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 274.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 274.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 274.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 274.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 273.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 272.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 272.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 272.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 272.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 271.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 271.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 270.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 270.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 270.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 269.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 268.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 268.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 267.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 267.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 266.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 266.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 265.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 265.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 265.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 264.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 264.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 264.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 264.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 263.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 262.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 262.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 261.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 261.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 261.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 260.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 260.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 260.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 259.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 259.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 258.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 258.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 258.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 257.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 257.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 257.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 257.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 256.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 256.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 255.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 255.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 255.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 255.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 254.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 254.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 254.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 254.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 254.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 253.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 253.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 253.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 252.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 252.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 251.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 251.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 250.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 250.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 250.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 250.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 250.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 249.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 249.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 248.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 248.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 248.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 247.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 247.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 247.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 247.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 247.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 246.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 246.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 245.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 245.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 245.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 245.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 244.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 243.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 243.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 242.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 242.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 242.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 241.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 241.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 239.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 239.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 237.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 237.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 236.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 235.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 235.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 232.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 231.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 231.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 230.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 230.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 230.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 229.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 228.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 228.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 228.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 227.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 227.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 226.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 226.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 225.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 224.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 223.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 221.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 219.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 219.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 219.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 218.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 215.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 215.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 215.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 215.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 212.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 211.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 211.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 210.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 210.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 209.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 209.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 206.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 206.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 204.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 203.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 201.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 200.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 195.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 187.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 251.6
Samples: 246

Max nTPM: 439.4
Min nTPM: 170.2
Std nTPM: 45.6
Median nTPM: 242.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 439.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 407.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 406.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 402.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 391.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 372.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 360.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 358.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 358.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 352.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 349.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 345.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 335.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 331.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 330.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 327.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 327.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 326.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 324.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 320.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 320.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 316.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 315.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 313.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 313.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 311.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 311.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 310.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 310.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 309.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 307.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 306.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 305.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 302.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 301.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 300.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 299.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 296.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 295.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 295.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 293.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 292.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 292.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 291.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 290.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 290.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 289.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 286.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 285.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 283.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 281.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 281.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 280.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 280.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 276.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 274.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 274.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 273.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 273.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 271.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 271.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 270.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 270.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 270.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 270.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 269.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 268.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 268.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 266.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 264.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 264.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 264.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 263.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 263.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 262.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 262.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 262.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 260.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 260.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 259.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 259.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 258.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 258.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 258.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 257.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 257.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 256.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 256.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 256.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 256.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 256.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 255.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 255.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 254.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 253.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 253.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 253.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 252.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 252.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 251.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 250.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 250.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 250.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 249.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 249.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 248.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 248.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 248.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 247.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 247.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 247.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 245.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 245.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 245.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 245.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 244.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 244.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 243.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 243.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 243.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 243.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 242.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 242.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 242.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 241.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 241.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 241.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 240.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 239.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 238.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 238.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 238.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 237.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 237.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 236.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 236.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 236.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 236.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 235.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 235.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 235.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 234.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 234.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 234.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 234.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 233.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 233.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 233.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 233.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 231.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 231.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 231.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 231.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 231.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 230.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 230.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 229.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 229.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 228.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 228.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 228.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 228.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 228.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 228.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 227.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 227.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 226.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 226.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 226.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 226.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 226.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 226.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 225.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 225.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 225.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 225.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 225.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 225.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 224.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 224.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 224.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 224.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 223.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 223.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 223.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 222.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 222.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 221.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 221.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 220.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 220.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 219.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 219.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 219.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 219.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 219.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 218.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 217.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 217.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 216.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 215.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 213.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 213.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 213.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 212.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 212.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 212.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 211.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 211.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 211.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 211.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 210.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 210.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 210.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 209.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 209.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 209.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 208.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 206.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 205.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 205.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 203.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 201.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 201.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 199.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 198.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 197.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 197.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 196.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 195.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 195.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 193.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 193.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 193.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 188.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 188.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 187.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 187.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 186.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 185.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 185.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 182.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 176.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 176.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 174.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 170.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 276.3
Samples: 205

Max nTPM: 495.5
Min nTPM: 190.4
Std nTPM: 51.1
Median nTPM: 270.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 495.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 444.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 440.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 405.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 390.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 385.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 378.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 376.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 375.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 374.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 372.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 371.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 368.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 366.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 366.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 362.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 360.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 350.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 347.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 344.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 344.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 344.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 343.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 343.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 341.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 340.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 335.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 335.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 331.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 325.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 323.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 320.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 318.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 317.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 315.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 314.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 313.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 313.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 312.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 311.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 310.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 310.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 309.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 308.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 308.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 308.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 308.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 306.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 305.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 304.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 304.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 303.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 302.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 301.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 301.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 297.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 297.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 297.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 296.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 295.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 295.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 294.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 294.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 294.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 293.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 293.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 292.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 292.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 292.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 291.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 290.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 290.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 290.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 289.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 287.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 287.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 287.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 287.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 286.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 285.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 284.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 283.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 283.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 282.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 282.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 282.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 282.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 282.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 281.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 281.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 280.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 280.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 279.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 277.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 277.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 276.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 274.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 274.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 273.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 273.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 272.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 272.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 270.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 268.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 268.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 268.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 266.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 264.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 264.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 263.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 263.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 262.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 258.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 256.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 255.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 254.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 254.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 253.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 253.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 253.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 253.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 252.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 252.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 252.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 252.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 252.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 252.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 252.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 252.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 251.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 251.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 250.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 250.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 250.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 249.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 249.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 249.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 249.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 248.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 248.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 247.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 247.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 246.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 245.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 245.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 243.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 243.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 241.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 241.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 241.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 239.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 238.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 238.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 237.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 236.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 236.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 236.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 236.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 235.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 235.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 234.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 234.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 233.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 233.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 232.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 232.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 232.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 231.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 231.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 230.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 230.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 230.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 228.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 228.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 227.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 227.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 227.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 226.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 226.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 224.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 222.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 221.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 220.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 220.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 218.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 218.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 218.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 217.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 217.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 216.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 213.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 212.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 211.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 211.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 206.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 206.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 205.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 200.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 199.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 197.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 197.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 196.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 194.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 191.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 190.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 941.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 804.6
FF:10164-103B2 76 years, female 804.6
Globus pallidus
Scaled Tags Per Million: 941.9
FF:10175-103C4 60 years, female 1036.4
FF:10161-103A8 76 years, female 847.3
Nucleus accumbens
Scaled Tags Per Million: 897.7
FF:10037-101F1 23-56 years, mixed 897.7
Putamen
Scaled Tags Per Million: 796.4
FF:10176-103C5 60 years, female 796.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 434.7
Pig sample Sample description nTPM
Caudate
nTPM: 288.9
Samples: 4

Max nTPM: 331.2
Min nTPM: 249.4
Sample A Female 302.2
Sample B Female 272.8
Sample C Male 331.2
Sample D Male 249.4
Putamen
nTPM: 434.7
Samples: 4

Max nTPM: 525.1
Min nTPM: 337.1
Sample A Female 525.1
Sample B Female 337.1
Sample C Male 498.0
Sample D Male 378.7
Septum
nTPM: 418.2
Samples: 4

Max nTPM: 452.4
Min nTPM: 347.5
Sample A Female 444.7
Sample B Female 347.5
Sample C Male 452.4
Sample D Male 428.0
Ventral pallidum
nTPM: 358.5
Samples: 4

Max nTPM: 383.4
Min nTPM: 303.4
Sample A Female 303.4
Sample B Female 373.0
Sample C Male 383.4
Sample D Male 374.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 587.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 548.5
Samples: 4

Max nTPM: 572.0
Min nTPM: 530.2
Sample A Male 545.9
Sample B Male 546.0
Sample C Female 530.2
Sample D Female 572.0
Septum
nTPM: 587.8
Samples: 4

Max nTPM: 649.1
Min nTPM: 509.3
Sample A Male 509.3
Sample B Male 649.1
Sample C Female 624.2
Sample D Female 568.5
Ventral forebrain
nTPM: 543.0
Samples: 4

Max nTPM: 612.7
Min nTPM: 504.1
Sample A Male 551.0
Sample B Male 504.1
Sample C Female 612.7
Sample D Female 504.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 17.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 17.5
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 17.5
Pallidum
Expression energy: 17.7
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 17.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.