HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.3 nTPM
HPA:11.3 nTPM
GTEx:5.8 nTPM
FANTOM5:21.8 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:7.9 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019493Antibody CAB020673
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.3
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
1855 Male, age 76, left hemisphere 13.4
1898 Male, age 80, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.1
1911 Female, age 85, right hemisphere 10.1
2148 Female, age 91, left hemisphere 9.5
2529 Female, age 94, left hemisphere 9.5
Dentate gyrus
nTPM: 9.8
2010 Male, age 76, both hemispheres 11.5
2246 Female, age 85, both hemispheres 10.2
1927 Female, age 91, both hemispheres 9.5
2528 Male, age 74, both hemispheres 9.2
2530 Female, age 94, left hemisphere 9.2
2531 Female, age 67, both hemispheres 9.2
Entorhinal gyrus
nTPM: 9.9
2117 Female, age 91, right hemisphere 12.1
1787 Male, age 76, left hemisphere 11.7
2613 Female, age 94, left hemisphere 9.4
1938 Female, age 85, left hemisphere 9.2
2764 Male, age 80, right hemisphere 8.8
2686 Male, age 75, right hemisphere 8.3
Hippocampus, CA1
nTPM: 9.9
2045 Male, age 76, both hemispheres 11.1
2082 Female, age 91, right hemisphere 11.0
1873 Female, age 85, both hemispheres 9.7
2527 Male, age 74, both hemispheres 9.1
2749 Male, age 80, left hemisphere 8.7
Hippocampus, CA2
nTPM: 11.1
1940 Female, age 85, left hemisphere 13.7
1892 Male, age 76, both hemispheres 11.6
2437 Female, age 94, left hemisphere 11.0
2113 Female, age 91, right hemisphere 10.6
1963 Male, age 80, left hemisphere 10.4
2249 Male, age 74, both hemispheres 9.2
Hippocampus, CA3
nTPM: 9.3
1867 Male, age 76, both hemispheres 12.4
1891 Female, age 85, both hemispheres 10.3
2861 Female, age 67, both hemispheres 9.0
2137 Male, age 80, left hemisphere 8.7
2436 Male, age 74, both hemispheres 8.7
2620 Female, age 94, left hemisphere 6.9
Parahippocampal cortex
nTPM: 10.4
2250 Female, age 67, right hemisphere 14.7
2018 Male, age 76, both hemispheres 12.9
2692 Male, age 74, both hemispheres 10.7
2693 Female, age 94, both hemispheres 10.6
1850 Male, age 80, both hemispheres 9.6
2532 Female, age 72, left hemisphere 9.6
1990 Female, age 91, right hemisphere 9.5
1933 Female, age 85, both hemispheres 9.4
2245 Female, age 91, both hemispheres 9.1
2622 Female, age 67, right hemisphere 8.4
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 13.0
2848 Male, age 76, right hemisphere 10.2
1841 Female, age 85, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.0
1794 Male, age 80, right hemisphere 8.9
Subiculum
nTPM: 11.3
2042 Male, age 76, both hemispheres 13.3
2729 Female, age 91, right hemisphere 12.5
2438 Female, age 94, left hemisphere 11.8
1901 Male, age 80, both hemispheres 10.3
2619 Male, age 74, both hemispheres 10.1
1977 Female, age 85, both hemispheres 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.8
Samples: 197

Max nTPM: 42.8
Min nTPM: 0.7
Std nTPM: 5.2
Median nTPM: 4.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 42.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 29.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 23.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 23.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 18.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 16.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 16.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 15.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 14.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.8
FF:10153-102I9 76 years, female 32.1
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 14.5
Min nTPM: 8.5
Sample A Female 14.5
Sample B Female 10.2
Sample C Male 8.5
Sample D Male 8.5
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.5
Sample A Female 6.3
Sample B Female 6.2
Sample C Male 5.3
Sample D Male 4.5
Subiculum
nTPM: 8.0
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.0
Sample A Female 8.7
Sample B Female 7.8
Sample C Male 7.0
Sample D Male 8.3
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 7.4
Sample A Female 12.2
Sample B Female 7.4
Sample C Male 11.1
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.4
Sample A Male 10.6
Sample B Male 6.4
Sample C Female 7.5
Sample D Female 6.9
Hippocampal formation
nTPM: 6.8
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.4
Sample A Male 6.8
Sample B Male 6.4
Sample C Female 7.1
Sample D Female 6.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
71612196 Antisense, RP_050927_02_C12, Mouse strain C57BL/6J (56 days, male) 4.9

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