HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:11.7 nTPM
FANTOM5:19.1 Scaled Tags Per Million
Pig:63.9 nTPM
Mouse:139.3 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
2148 Female, age 91, left hemisphere 24.5
2529 Female, age 94, left hemisphere 22.0
2621 Female, age 67, right hemisphere 19.6
1855 Male, age 76, left hemisphere 18.5
1911 Female, age 85, right hemisphere 16.9
1898 Male, age 80, left hemisphere 14.9
Dentate gyrus
nTPM: 18.1
2531 Female, age 67, both hemispheres 26.3
2246 Female, age 85, both hemispheres 20.8
2528 Male, age 74, both hemispheres 18.9
1927 Female, age 91, both hemispheres 17.1
2530 Female, age 94, left hemisphere 16.2
2010 Male, age 76, both hemispheres 9.6
Entorhinal gyrus
nTPM: 16.2
2686 Male, age 75, right hemisphere 25.1
2117 Female, age 91, right hemisphere 19.7
1938 Female, age 85, left hemisphere 17.4
1787 Male, age 76, left hemisphere 12.0
2764 Male, age 80, right hemisphere 11.6
2613 Female, age 94, left hemisphere 11.4
Hippocampus, CA1
nTPM: 18.8
2045 Male, age 76, both hemispheres 28.3
2527 Male, age 74, both hemispheres 23.0
1873 Female, age 85, both hemispheres 20.9
2749 Male, age 80, left hemisphere 11.5
2082 Female, age 91, right hemisphere 10.6
Hippocampus, CA2
nTPM: 15.1
1892 Male, age 76, both hemispheres 18.0
1963 Male, age 80, left hemisphere 16.7
2437 Female, age 94, left hemisphere 16.1
2113 Female, age 91, right hemisphere 15.4
1940 Female, age 85, left hemisphere 12.8
2249 Male, age 74, both hemispheres 11.5
Hippocampus, CA3
nTPM: 22.0
2861 Female, age 67, both hemispheres 34.1
2620 Female, age 94, left hemisphere 32.4
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 17.4
2137 Male, age 80, left hemisphere 14.4
2436 Male, age 74, both hemispheres 12.5
Parahippocampal cortex
nTPM: 13.7
2692 Male, age 74, both hemispheres 21.8
2622 Female, age 67, right hemisphere 18.8
1933 Female, age 85, both hemispheres 18.7
2250 Female, age 67, right hemisphere 14.3
2245 Female, age 91, both hemispheres 14.0
2693 Female, age 94, both hemispheres 12.2
1990 Female, age 91, right hemisphere 10.8
2018 Male, age 76, both hemispheres 9.6
1850 Male, age 80, both hemispheres 9.3
2532 Female, age 72, left hemisphere 7.8
Perirhinal gyrus
nTPM: 10.7
1794 Male, age 80, right hemisphere 12.8
2848 Male, age 76, right hemisphere 11.5
1847 Female, age 91, left hemisphere 11.2
2521 Female, age 94, right hemisphere 9.8
1841 Female, age 85, right hemisphere 8.3
Subiculum
nTPM: 14.1
2729 Female, age 91, right hemisphere 23.5
2619 Male, age 74, both hemispheres 18.4
1977 Female, age 85, both hemispheres 11.9
2438 Female, age 94, left hemisphere 11.2
2042 Male, age 76, both hemispheres 10.1
1901 Male, age 80, both hemispheres 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 39.6
Min nTPM: 1.5
Std nTPM: 7.0
Median nTPM: 10.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 39.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 39.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 37.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 36.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 32.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 32.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 26.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 26.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 25.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 24.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.1
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 16.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 54.7
Min nTPM: 40.8
Sample A Female 54.7
Sample B Female 46.6
Sample C Male 40.8
Sample D Male 50.0
Entorhinal cortex
nTPM: 63.9
Samples: 4

Max nTPM: 67.1
Min nTPM: 58.5
Sample A Female 66.0
Sample B Female 63.9
Sample C Male 67.1
Sample D Male 58.5
Subiculum
nTPM: 57.9
Samples: 4

Max nTPM: 77.2
Min nTPM: 48.9
Sample A Female 77.2
Sample B Female 51.3
Sample C Male 48.9
Sample D Male 54.2
Ventral hippocampus
nTPM: 52.9
Samples: 4

Max nTPM: 64.4
Min nTPM: 46.8
Sample A Female 46.8
Sample B Female 47.5
Sample C Male 64.4
Sample D Male 52.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 139.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.2
Samples: 4

Max nTPM: 136.5
Min nTPM: 102.1
Sample A Male 116.4
Sample B Male 102.1
Sample C Female 136.5
Sample D Female 129.8
Hippocampal formation
nTPM: 139.3
Samples: 4

Max nTPM: 157.3
Min nTPM: 130.7
Sample A Male 157.3
Sample B Male 130.7
Sample C Female 131.1
Sample D Female 138.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
74562206 Antisense, RP_060208_02_D10, Mouse strain C57BL/6J (56 days, male) 2.6
74822814 Antisense, RP_050921_01_C08, Mouse strain C57BL/6J (56 days, male) 1.6

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