HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.2 nTPM
HPA:16.2 nTPM
GTEx:15.5 nTPM
FANTOM5:54.3 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:26.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026897
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
2148 Female, age 91, left hemisphere 16.0
1911 Female, age 85, right hemisphere 15.2
1855 Male, age 76, left hemisphere 14.1
2529 Female, age 94, left hemisphere 13.9
2621 Female, age 67, right hemisphere 13.7
1898 Male, age 80, left hemisphere 13.1
Dentate gyrus
nTPM: 14.8
2531 Female, age 67, both hemispheres 18.2
1927 Female, age 91, both hemispheres 15.6
2246 Female, age 85, both hemispheres 15.2
2528 Male, age 74, both hemispheres 14.7
2530 Female, age 94, left hemisphere 12.7
2010 Male, age 76, both hemispheres 12.3
Entorhinal gyrus
nTPM: 14.4
2686 Male, age 75, right hemisphere 15.5
2117 Female, age 91, right hemisphere 14.5
2764 Male, age 80, right hemisphere 14.5
1938 Female, age 85, left hemisphere 14.3
2613 Female, age 94, left hemisphere 14.3
1787 Male, age 76, left hemisphere 13.4
Hippocampus, CA1
nTPM: 14.5
1873 Female, age 85, both hemispheres 15.0
2527 Male, age 74, both hemispheres 15.0
2082 Female, age 91, right hemisphere 14.9
2045 Male, age 76, both hemispheres 14.4
2749 Male, age 80, left hemisphere 13.4
Hippocampus, CA2
nTPM: 14.0
2113 Female, age 91, right hemisphere 15.2
1940 Female, age 85, left hemisphere 14.2
1963 Male, age 80, left hemisphere 13.9
2437 Female, age 94, left hemisphere 13.7
2249 Male, age 74, both hemispheres 13.5
1892 Male, age 76, both hemispheres 13.4
Hippocampus, CA3
nTPM: 15.2
2620 Female, age 94, left hemisphere 18.7
1891 Female, age 85, both hemispheres 16.6
2137 Male, age 80, left hemisphere 15.2
2861 Female, age 67, both hemispheres 14.7
2436 Male, age 74, both hemispheres 13.9
1867 Male, age 76, both hemispheres 12.3
Parahippocampal cortex
nTPM: 15.2
2693 Female, age 94, both hemispheres 18.0
1850 Male, age 80, both hemispheres 16.3
2532 Female, age 72, left hemisphere 16.2
2622 Female, age 67, right hemisphere 15.3
2692 Male, age 74, both hemispheres 15.2
1933 Female, age 85, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.4
2250 Female, age 67, right hemisphere 14.3
2018 Male, age 76, both hemispheres 12.4
Perirhinal gyrus
nTPM: 16.2
2848 Male, age 76, right hemisphere 18.2
1841 Female, age 85, right hemisphere 17.2
1794 Male, age 80, right hemisphere 15.6
2521 Female, age 94, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.8
Subiculum
nTPM: 14.4
1977 Female, age 85, both hemispheres 15.8
2729 Female, age 91, right hemisphere 15.2
1901 Male, age 80, both hemispheres 14.6
2042 Male, age 76, both hemispheres 14.3
2619 Male, age 74, both hemispheres 14.0
2438 Female, age 94, left hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 25.6
Min nTPM: 10.5
Std nTPM: 2.6
Median nTPM: 15.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 22.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 21.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 21.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 21.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 20.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.3
FF:10153-102I9 76 years, female 55.4
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 33.0
Min nTPM: 25.9
Sample A Female 25.9
Sample B Female 31.0
Sample C Male 30.3
Sample D Male 33.0
Entorhinal cortex
nTPM: 30.8
Samples: 4

Max nTPM: 33.2
Min nTPM: 27.8
Sample A Female 27.8
Sample B Female 33.2
Sample C Male 32.2
Sample D Male 29.9
Subiculum
nTPM: 29.3
Samples: 4

Max nTPM: 31.5
Min nTPM: 27.1
Sample A Female 27.1
Sample B Female 31.5
Sample C Male 29.3
Sample D Male 29.2
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 27.3
Sample A Female 27.6
Sample B Female 33.2
Sample C Male 27.3
Sample D Male 30.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 23.6
Sample A Male 27.8
Sample B Male 28.0
Sample C Female 23.6
Sample D Female 25.3
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 29.9
Min nTPM: 23.7
Sample A Male 23.7
Sample B Male 29.9
Sample C Female 27.5
Sample D Female 26.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
77620231 Antisense, RP_070129_03_B07, Mouse strain C57BL/6J (56 days, male) 2.0

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