COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.4 nTPM
HPA:11.7 nTPM
GTEx:31.4 nTPM
FANTOM5:29.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 11.7
overview
Male, age 54 		Colon sample 67
nTPM: 16.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 15.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 31.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 31.4
Samples: 373

Max nTPM: 87.0
Min nTPM: 10.9
Std nTPM: 8.4
Median nTPM: 31.1
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 87.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 66.9
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 53.3
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 53.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 52.0
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 51.9
GTEX-14E1K-1626-SM-664MO 50-59 years, male 51.8
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 51.2
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 50.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 50.1
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 49.3
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Colon - Transverse
Average nTPM: 22.3
Samples: 406

Max nTPM: 104.9
Min nTPM: 9.8
Std nTPM: 9.6
Median nTPM: 20.5
GTEX-14JIY-3326-SM-6871E 60-69 years, male 104.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 72.7
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 63.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 60.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 56.6
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 49.1
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 47.1
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 47.0
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 44.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 43.9
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 42.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 29.3
FF:10014-101C5 62,83,84 years, mixed 29.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.