HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.0 nTPM
HPA:54.0 nTPM
GTEx:63.1 nTPM
FANTOM5:113.9 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:61.3 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021216Antibody HPA021232Antibody HPA021242
Glial cells LowMediumNot detected
Neuronal cells MediumHighNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
2529 Female, age 94, left hemisphere 54.8
1898 Male, age 80, left hemisphere 54.1
1855 Male, age 76, left hemisphere 53.4
1911 Female, age 85, right hemisphere 53.2
2621 Female, age 67, right hemisphere 52.8
2148 Female, age 91, left hemisphere 50.8
Dentate gyrus
nTPM: 52.0
2010 Male, age 76, both hemispheres 54.1
2530 Female, age 94, left hemisphere 53.4
2246 Female, age 85, both hemispheres 52.9
1927 Female, age 91, both hemispheres 50.9
2528 Male, age 74, both hemispheres 50.6
2531 Female, age 67, both hemispheres 49.9
Entorhinal gyrus
nTPM: 52.3
1938 Female, age 85, left hemisphere 54.6
2117 Female, age 91, right hemisphere 52.8
2686 Male, age 75, right hemisphere 52.6
2764 Male, age 80, right hemisphere 52.2
1787 Male, age 76, left hemisphere 51.2
2613 Female, age 94, left hemisphere 50.5
Hippocampus, CA1
nTPM: 54.0
2749 Male, age 80, left hemisphere 60.2
1873 Female, age 85, both hemispheres 53.5
2045 Male, age 76, both hemispheres 53.2
2527 Male, age 74, both hemispheres 52.5
2082 Female, age 91, right hemisphere 50.5
Hippocampus, CA2
nTPM: 52.0
1892 Male, age 76, both hemispheres 54.3
1963 Male, age 80, left hemisphere 52.6
2113 Female, age 91, right hemisphere 51.4
2249 Male, age 74, both hemispheres 51.4
2437 Female, age 94, left hemisphere 51.3
1940 Female, age 85, left hemisphere 51.1
Hippocampus, CA3
nTPM: 51.8
2137 Male, age 80, left hemisphere 56.9
1867 Male, age 76, both hemispheres 52.8
1891 Female, age 85, both hemispheres 51.9
2436 Male, age 74, both hemispheres 50.7
2620 Female, age 94, left hemisphere 49.5
2861 Female, age 67, both hemispheres 49.1
Parahippocampal cortex
nTPM: 52.2
2245 Female, age 91, both hemispheres 54.3
2532 Female, age 72, left hemisphere 53.1
2250 Female, age 67, right hemisphere 52.9
1933 Female, age 85, both hemispheres 52.8
2018 Male, age 76, both hemispheres 52.8
1850 Male, age 80, both hemispheres 52.2
2692 Male, age 74, both hemispheres 51.5
2693 Female, age 94, both hemispheres 51.4
1990 Female, age 91, right hemisphere 51.2
2622 Female, age 67, right hemisphere 50.0
Perirhinal gyrus
nTPM: 52.7
1841 Female, age 85, right hemisphere 53.3
1847 Female, age 91, left hemisphere 52.8
2521 Female, age 94, right hemisphere 52.6
2848 Male, age 76, right hemisphere 52.6
1794 Male, age 80, right hemisphere 52.0
Subiculum
nTPM: 52.8
2042 Male, age 76, both hemispheres 55.6
1901 Male, age 80, both hemispheres 54.7
1977 Female, age 85, both hemispheres 53.5
2438 Female, age 94, left hemisphere 51.6
2619 Male, age 74, both hemispheres 51.0
2729 Female, age 91, right hemisphere 50.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.1
Samples: 197

Max nTPM: 102.1
Min nTPM: 33.2
Std nTPM: 9.8
Median nTPM: 61.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 102.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 98.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 85.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 85.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 84.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 83.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 83.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 82.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 81.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.9
FF:10169-103B7 60 years, female 116.1
FF:10153-102I9 76 years, female 111.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 15.4
Sample A Female 22.9
Sample B Female 17.4
Sample C Male 16.7
Sample D Male 15.4
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.6
Sample A Female 17.8
Sample B Female 15.7
Sample C Male 13.6
Sample D Male 14.6
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 22.2
Min nTPM: 14.2
Sample A Female 22.2
Sample B Female 14.7
Sample C Male 14.2
Sample D Male 15.0
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 20.7
Min nTPM: 11.7
Sample A Female 16.1
Sample B Female 11.7
Sample C Male 17.6
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.8
Samples: 4

Max nTPM: 62.7
Min nTPM: 57.0
Sample A Male 57.2
Sample B Male 62.7
Sample C Female 62.4
Sample D Female 57.0
Hippocampal formation
nTPM: 61.3
Samples: 4

Max nTPM: 65.0
Min nTPM: 57.7
Sample A Male 64.3
Sample B Male 58.2
Sample C Female 65.0
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
67936203 Antisense, RP_041102_01_A12, Mouse strain C57BL/6J (56 days, male) 17.2
68203452 Antisense, RP_041102_01_A12, Mouse strain C57BL/6J (56 days, male) 15.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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