HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.9 nTPM
HPA:29.9 nTPM
GTEx:32.6 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:33.5 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
2529 Female, age 94, left hemisphere 34.1
1911 Female, age 85, right hemisphere 31.9
2621 Female, age 67, right hemisphere 31.4
1898 Male, age 80, left hemisphere 27.7
2148 Female, age 91, left hemisphere 26.8
1855 Male, age 76, left hemisphere 24.4
Dentate gyrus
nTPM: 25.9
2530 Female, age 94, left hemisphere 30.3
1927 Female, age 91, both hemispheres 28.4
2531 Female, age 67, both hemispheres 26.0
2246 Female, age 85, both hemispheres 24.6
2528 Male, age 74, both hemispheres 23.5
2010 Male, age 76, both hemispheres 22.7
Entorhinal gyrus
nTPM: 26.2
2613 Female, age 94, left hemisphere 33.0
1787 Male, age 76, left hemisphere 27.9
2764 Male, age 80, right hemisphere 26.3
2686 Male, age 75, right hemisphere 26.0
1938 Female, age 85, left hemisphere 24.5
2117 Female, age 91, right hemisphere 19.3
Hippocampus, CA1
nTPM: 27.0
2749 Male, age 80, left hemisphere 40.0
2527 Male, age 74, both hemispheres 26.9
1873 Female, age 85, both hemispheres 25.8
2082 Female, age 91, right hemisphere 23.9
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 29.9
1963 Male, age 80, left hemisphere 43.7
2437 Female, age 94, left hemisphere 33.6
1892 Male, age 76, both hemispheres 30.4
2113 Female, age 91, right hemisphere 26.1
1940 Female, age 85, left hemisphere 23.3
2249 Male, age 74, both hemispheres 22.2
Hippocampus, CA3
nTPM: 29.7
2137 Male, age 80, left hemisphere 43.3
2861 Female, age 67, both hemispheres 34.3
1867 Male, age 76, both hemispheres 28.9
2620 Female, age 94, left hemisphere 26.9
1891 Female, age 85, both hemispheres 24.4
2436 Male, age 74, both hemispheres 20.6
Parahippocampal cortex
nTPM: 27.0
2245 Female, age 91, both hemispheres 33.4
2622 Female, age 67, right hemisphere 32.1
2018 Male, age 76, both hemispheres 31.1
1933 Female, age 85, both hemispheres 27.3
2532 Female, age 72, left hemisphere 26.0
2250 Female, age 67, right hemisphere 25.7
1850 Male, age 80, both hemispheres 24.3
1990 Female, age 91, right hemisphere 24.2
2692 Male, age 74, both hemispheres 23.8
2693 Female, age 94, both hemispheres 21.8
Perirhinal gyrus
nTPM: 24.9
1847 Female, age 91, left hemisphere 28.8
2521 Female, age 94, right hemisphere 28.4
1794 Male, age 80, right hemisphere 27.5
1841 Female, age 85, right hemisphere 22.5
2848 Male, age 76, right hemisphere 17.3
Subiculum
nTPM: 25.3
2438 Female, age 94, left hemisphere 30.3
1901 Male, age 80, both hemispheres 28.3
1977 Female, age 85, both hemispheres 25.8
2619 Male, age 74, both hemispheres 25.1
2042 Male, age 76, both hemispheres 24.1
2729 Female, age 91, right hemisphere 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.6
Samples: 197

Max nTPM: 93.2
Min nTPM: 11.5
Std nTPM: 11.9
Median nTPM: 31.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 93.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 65.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 62.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 60.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 60.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 59.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 56.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 52.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.7
FF:10153-102I9 76 years, female 39.1
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 28.4
Min nTPM: 18.4
Sample A Female 27.5
Sample B Female 28.4
Sample C Male 27.3
Sample D Male 18.4
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 21.2
Sample A Female 22.7
Sample B Female 22.4
Sample C Male 25.8
Sample D Male 21.2
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 15.5
Sample A Female 24.5
Sample B Female 17.3
Sample C Male 19.9
Sample D Male 15.5
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 33.8
Min nTPM: 16.6
Sample A Female 16.6
Sample B Female 18.5
Sample C Male 28.1
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.5
Samples: 4

Max nTPM: 35.7
Min nTPM: 29.7
Sample A Male 35.5
Sample B Male 35.7
Sample C Female 29.7
Sample D Female 33.0
Hippocampal formation
nTPM: 26.3
Samples: 4

Max nTPM: 27.7
Min nTPM: 24.3
Sample A Male 26.0
Sample B Male 27.7
Sample C Female 24.3
Sample D Female 27.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
71496405 Antisense, RP_050913_04_E03, Mouse strain C57BL/6J (56 days, male) 5.9

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