HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.3 nTPM
HPA:48.3 nTPM
GTEx:66.9 nTPM
FANTOM5:592.7 Scaled Tags Per Million
Pig:239.8 nTPM
Mouse:389.2 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008209Antibody HPA023483Antibody CAB034434
Glial cells Not detectedLowHigh
Neuronal cells Not detectedLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.3
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 9.8
2531 Female, age 67, both hemispheres 32.4
1927 Female, age 91, both hemispheres 26.8
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 8.9
2764 Male, age 80, right hemisphere 27.8
2613 Female, age 94, left hemisphere 25.5
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 67.2
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 0.9
1892 Male, age 76, both hemispheres 5.7
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 17.1
2620 Female, age 94, left hemisphere 63.5
2137 Male, age 80, left hemisphere 32.5
2861 Female, age 67, both hemispheres 6.7
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 9.7
1850 Male, age 80, both hemispheres 58.9
2693 Female, age 94, both hemispheres 29.6
2245 Female, age 91, both hemispheres 5.2
2532 Female, age 72, left hemisphere 3.6
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 48.3
1794 Male, age 80, right hemisphere 93.5
1847 Female, age 91, left hemisphere 70.2
1841 Female, age 85, right hemisphere 43.6
2521 Female, age 94, right hemisphere 34.4
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.9
Samples: 197

Max nTPM: 299.5
Min nTPM: 8.5
Std nTPM: 61.5
Median nTPM: 43.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 299.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 283.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 275.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 273.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 260.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 249.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 220.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 215.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 211.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 206.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 203.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 592.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 592.7
FF:10169-103B7 60 years, female 809.8
FF:10153-102I9 76 years, female 375.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 239.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 177.4
Samples: 4

Max nTPM: 215.8
Min nTPM: 140.4
Sample A Female 215.8
Sample B Female 191.1
Sample C Male 162.3
Sample D Male 140.4
Entorhinal cortex
nTPM: 239.8
Samples: 4

Max nTPM: 273.1
Min nTPM: 223.2
Sample A Female 273.1
Sample B Female 226.2
Sample C Male 223.2
Sample D Male 236.8
Subiculum
nTPM: 205.5
Samples: 4

Max nTPM: 278.4
Min nTPM: 170.8
Sample A Female 278.4
Sample B Female 170.8
Sample C Male 192.2
Sample D Male 180.4
Ventral hippocampus
nTPM: 177.4
Samples: 4

Max nTPM: 235.8
Min nTPM: 123.6
Sample A Female 185.6
Sample B Female 123.6
Sample C Male 235.8
Sample D Male 164.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 389.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 389.2
Samples: 4

Max nTPM: 454.7
Min nTPM: 317.1
Sample A Male 376.1
Sample B Male 408.8
Sample C Female 317.1
Sample D Female 454.7
Hippocampal formation
nTPM: 275.3
Samples: 4

Max nTPM: 282.3
Min nTPM: 269.3
Sample A Male 273.0
Sample B Male 282.3
Sample C Female 276.7
Sample D Female 269.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
1009 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 13.3
1010 Antisense, RP_040227_01_08, Mouse strain C57BL/6J (56 days, male) 9.2

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