HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:135.8 nTPM
HPA:135.8 nTPM
GTEx:137.9 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:99.1 nTPM
Mouse:271.3 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052408
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.8
Sample id Sample description nTPM
Hippocampus
nTPM: 130.9
1898 Male, age 80, left hemisphere 140.0
1855 Male, age 76, left hemisphere 135.0
2529 Female, age 94, left hemisphere 132.2
2621 Female, age 67, right hemisphere 128.2
2148 Female, age 91, left hemisphere 127.8
1911 Female, age 85, right hemisphere 122.2
Dentate gyrus
nTPM: 128.7
1927 Female, age 91, both hemispheres 135.4
2010 Male, age 76, both hemispheres 135.0
2528 Male, age 74, both hemispheres 129.4
2530 Female, age 94, left hemisphere 125.4
2246 Female, age 85, both hemispheres 124.5
2531 Female, age 67, both hemispheres 122.7
Entorhinal gyrus
nTPM: 125.5
2764 Male, age 80, right hemisphere 131.1
1938 Female, age 85, left hemisphere 128.6
2686 Male, age 75, right hemisphere 125.9
1787 Male, age 76, left hemisphere 124.0
2117 Female, age 91, right hemisphere 121.7
2613 Female, age 94, left hemisphere 121.7
Hippocampus, CA1
nTPM: 135.8
2749 Male, age 80, left hemisphere 149.2
2045 Male, age 76, both hemispheres 138.9
1873 Female, age 85, both hemispheres 135.2
2527 Male, age 74, both hemispheres 132.1
2082 Female, age 91, right hemisphere 123.5
Hippocampus, CA2
nTPM: 129.0
1892 Male, age 76, both hemispheres 145.0
1963 Male, age 80, left hemisphere 136.5
2249 Male, age 74, both hemispheres 128.2
2437 Female, age 94, left hemisphere 122.5
2113 Female, age 91, right hemisphere 121.6
1940 Female, age 85, left hemisphere 120.5
Hippocampus, CA3
nTPM: 129.9
2137 Male, age 80, left hemisphere 135.3
1867 Male, age 76, both hemispheres 133.3
2620 Female, age 94, left hemisphere 130.8
2436 Male, age 74, both hemispheres 127.8
2861 Female, age 67, both hemispheres 126.6
1891 Female, age 85, both hemispheres 125.4
Parahippocampal cortex
nTPM: 126.5
1850 Male, age 80, both hemispheres 137.6
2692 Male, age 74, both hemispheres 131.0
1933 Female, age 85, both hemispheres 130.3
2018 Male, age 76, both hemispheres 126.4
2250 Female, age 67, right hemisphere 125.6
1990 Female, age 91, right hemisphere 125.5
2245 Female, age 91, both hemispheres 124.2
2693 Female, age 94, both hemispheres 122.6
2532 Female, age 72, left hemisphere 122.4
2622 Female, age 67, right hemisphere 119.3
Perirhinal gyrus
nTPM: 134.5
1847 Female, age 91, left hemisphere 143.4
1794 Male, age 80, right hemisphere 138.8
1841 Female, age 85, right hemisphere 134.2
2521 Female, age 94, right hemisphere 128.2
2848 Male, age 76, right hemisphere 127.9
Subiculum
nTPM: 127.9
2619 Male, age 74, both hemispheres 131.5
2438 Female, age 94, left hemisphere 129.3
1977 Female, age 85, both hemispheres 128.9
1901 Male, age 80, both hemispheres 128.8
2042 Male, age 76, both hemispheres 126.5
2729 Female, age 91, right hemisphere 122.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 137.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 137.9
Samples: 197

Max nTPM: 303.6
Min nTPM: 75.1
Std nTPM: 33.5
Median nTPM: 131.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 303.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 242.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 233.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 231.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 224.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 221.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 208.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 203.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 202.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 201.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 199.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.3
FF:10169-103B7 60 years, female 119.2
FF:10153-102I9 76 years, female 115.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 99.1
Samples: 4

Max nTPM: 124.5
Min nTPM: 76.4
Sample A Female 124.5
Sample B Female 93.6
Sample C Male 101.9
Sample D Male 76.4
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 87.8
Min nTPM: 62.9
Sample A Female 82.5
Sample B Female 87.8
Sample C Male 73.4
Sample D Male 62.9
Subiculum
nTPM: 83.8
Samples: 4

Max nTPM: 111.4
Min nTPM: 71.8
Sample A Female 111.4
Sample B Female 77.1
Sample C Male 74.8
Sample D Male 71.8
Ventral hippocampus
nTPM: 83.8
Samples: 4

Max nTPM: 91.8
Min nTPM: 63.6
Sample A Female 90.8
Sample B Female 63.6
Sample C Male 91.8
Sample D Male 89.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 271.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 261.5
Samples: 4

Max nTPM: 278.3
Min nTPM: 237.9
Sample A Male 237.9
Sample B Male 259.0
Sample C Female 278.3
Sample D Female 270.8
Hippocampal formation
nTPM: 271.3
Samples: 4

Max nTPM: 312.6
Min nTPM: 250.0
Sample A Male 312.6
Sample B Male 253.4
Sample C Female 269.3
Sample D Female 250.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
69014818 Antisense, RP_050310_01_G07, Mouse strain C57BL/6J (56 days, male) 14.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.