HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1421.2 nTPM
HPA:1421.2 nTPM
GTEx:1248.1 nTPM
FANTOM5:324.9 Scaled Tags Per Million
Pig:239.2 nTPM
Mouse:212.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006047
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1421.2
Sample id Sample description nTPM
Hippocampus
nTPM: 1421.2
2529 Female, age 94, left hemisphere 1459.8
1898 Male, age 80, left hemisphere 1443.8
2621 Female, age 67, right hemisphere 1437.4
1911 Female, age 85, right hemisphere 1399.7
1855 Male, age 76, left hemisphere 1399.0
2148 Female, age 91, left hemisphere 1387.6
Dentate gyrus
nTPM: 1407.2
2530 Female, age 94, left hemisphere 1467.6
2531 Female, age 67, both hemispheres 1415.8
2246 Female, age 85, both hemispheres 1411.2
2010 Male, age 76, both hemispheres 1410.5
1927 Female, age 91, both hemispheres 1378.1
2528 Male, age 74, both hemispheres 1359.8
Entorhinal gyrus
nTPM: 1406.2
2686 Male, age 75, right hemisphere 1451.9
1787 Male, age 76, left hemisphere 1422.7
2117 Female, age 91, right hemisphere 1404.5
1938 Female, age 85, left hemisphere 1396.6
2764 Male, age 80, right hemisphere 1386.2
2613 Female, age 94, left hemisphere 1375.0
Hippocampus, CA1
nTPM: 1391.9
2527 Male, age 74, both hemispheres 1411.5
2045 Male, age 76, both hemispheres 1401.4
2749 Male, age 80, left hemisphere 1387.6
2082 Female, age 91, right hemisphere 1386.1
1873 Female, age 85, both hemispheres 1372.8
Hippocampus, CA2
nTPM: 1392.7
2437 Female, age 94, left hemisphere 1421.8
1963 Male, age 80, left hemisphere 1407.9
2113 Female, age 91, right hemisphere 1392.2
1892 Male, age 76, both hemispheres 1381.5
2249 Male, age 74, both hemispheres 1378.2
1940 Female, age 85, left hemisphere 1374.8
Hippocampus, CA3
nTPM: 1382.9
2861 Female, age 67, both hemispheres 1415.3
1867 Male, age 76, both hemispheres 1394.7
1891 Female, age 85, both hemispheres 1394.6
2137 Male, age 80, left hemisphere 1371.1
2436 Male, age 74, both hemispheres 1367.0
2620 Female, age 94, left hemisphere 1354.5
Parahippocampal cortex
nTPM: 1401.4
2018 Male, age 76, both hemispheres 1463.3
2245 Female, age 91, both hemispheres 1424.8
2532 Female, age 72, left hemisphere 1419.7
2250 Female, age 67, right hemisphere 1417.7
1933 Female, age 85, both hemispheres 1401.4
1850 Male, age 80, both hemispheres 1394.1
2692 Male, age 74, both hemispheres 1389.8
2622 Female, age 67, right hemisphere 1376.3
1990 Female, age 91, right hemisphere 1374.7
2693 Female, age 94, both hemispheres 1352.7
Perirhinal gyrus
nTPM: 1401.5
1794 Male, age 80, right hemisphere 1413.0
1847 Female, age 91, left hemisphere 1412.0
1841 Female, age 85, right hemisphere 1404.3
2848 Male, age 76, right hemisphere 1397.2
2521 Female, age 94, right hemisphere 1381.2
Subiculum
nTPM: 1406.7
2042 Male, age 76, both hemispheres 1442.8
2438 Female, age 94, left hemisphere 1435.9
1977 Female, age 85, both hemispheres 1411.3
1901 Male, age 80, both hemispheres 1404.5
2619 Male, age 74, both hemispheres 1388.2
2729 Female, age 91, right hemisphere 1357.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1248.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1248.1
Samples: 197

Max nTPM: 3976.1
Min nTPM: 475.3
Std nTPM: 523.5
Median nTPM: 1134.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3976.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3197.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3082.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2784.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2783.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2612.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2567.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2456.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2367.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2331.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 2269.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 324.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 324.9
FF:10169-103B7 60 years, female 355.7
FF:10153-102I9 76 years, female 294.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 239.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 239.2
Samples: 4

Max nTPM: 327.7
Min nTPM: 158.9
Sample A Female 327.7
Sample B Female 196.7
Sample C Male 273.4
Sample D Male 158.9
Entorhinal cortex
nTPM: 208.5
Samples: 4

Max nTPM: 243.7
Min nTPM: 162.9
Sample A Female 204.2
Sample B Female 243.7
Sample C Male 223.1
Sample D Male 162.9
Subiculum
nTPM: 198.8
Samples: 4

Max nTPM: 303.4
Min nTPM: 143.8
Sample A Female 303.4
Sample B Female 191.9
Sample C Male 143.8
Sample D Male 156.2
Ventral hippocampus
nTPM: 204.0
Samples: 4

Max nTPM: 219.9
Min nTPM: 169.9
Sample A Female 214.4
Sample B Female 169.9
Sample C Male 219.9
Sample D Male 211.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 212.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 208.5
Samples: 4

Max nTPM: 228.6
Min nTPM: 191.3
Sample A Male 205.0
Sample B Male 208.9
Sample C Female 228.6
Sample D Female 191.3
Hippocampal formation
nTPM: 212.1
Samples: 4

Max nTPM: 255.5
Min nTPM: 187.7
Sample A Male 255.5
Sample B Male 198.8
Sample C Female 187.7
Sample D Female 206.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 2.6

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