HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.7 nTPM
HPA:69.7 nTPM
GTEx:67.5 nTPM
FANTOM5:83.5 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:35.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022971Antibody HPA078575
Glial cells Not detectedHigh
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.7
Sample id Sample description nTPM
Hippocampus
nTPM: 67.5
2529 Female, age 94, left hemisphere 71.2
1898 Male, age 80, left hemisphere 69.9
1911 Female, age 85, right hemisphere 67.5
2621 Female, age 67, right hemisphere 67.5
2148 Female, age 91, left hemisphere 65.1
1855 Male, age 76, left hemisphere 64.0
Dentate gyrus
nTPM: 66.4
2530 Female, age 94, left hemisphere 70.5
2528 Male, age 74, both hemispheres 68.8
2010 Male, age 76, both hemispheres 67.7
2246 Female, age 85, both hemispheres 64.7
2531 Female, age 67, both hemispheres 63.6
1927 Female, age 91, both hemispheres 62.9
Entorhinal gyrus
nTPM: 67.8
2764 Male, age 80, right hemisphere 71.5
2117 Female, age 91, right hemisphere 71.3
1938 Female, age 85, left hemisphere 67.3
1787 Male, age 76, left hemisphere 66.0
2686 Male, age 75, right hemisphere 66.0
2613 Female, age 94, left hemisphere 64.6
Hippocampus, CA1
nTPM: 65.4
2527 Male, age 74, both hemispheres 68.4
2749 Male, age 80, left hemisphere 67.4
1873 Female, age 85, both hemispheres 65.6
2082 Female, age 91, right hemisphere 64.9
2045 Male, age 76, both hemispheres 60.8
Hippocampus, CA2
nTPM: 67.3
1963 Male, age 80, left hemisphere 70.5
2249 Male, age 74, both hemispheres 69.8
2437 Female, age 94, left hemisphere 68.2
1940 Female, age 85, left hemisphere 66.6
1892 Male, age 76, both hemispheres 64.5
2113 Female, age 91, right hemisphere 64.1
Hippocampus, CA3
nTPM: 65.9
1891 Female, age 85, both hemispheres 70.2
2436 Male, age 74, both hemispheres 70.1
1867 Male, age 76, both hemispheres 66.3
2620 Female, age 94, left hemisphere 65.0
2861 Female, age 67, both hemispheres 62.2
2137 Male, age 80, left hemisphere 61.3
Parahippocampal cortex
nTPM: 64.9
2692 Male, age 74, both hemispheres 69.7
1850 Male, age 80, both hemispheres 68.6
1990 Female, age 91, right hemisphere 66.9
1933 Female, age 85, both hemispheres 66.0
2245 Female, age 91, both hemispheres 65.0
2018 Male, age 76, both hemispheres 64.3
2250 Female, age 67, right hemisphere 64.3
2532 Female, age 72, left hemisphere 64.0
2693 Female, age 94, both hemispheres 60.9
2622 Female, age 67, right hemisphere 59.9
Perirhinal gyrus
nTPM: 64.9
1794 Male, age 80, right hemisphere 69.5
1847 Female, age 91, left hemisphere 64.9
2521 Female, age 94, right hemisphere 63.9
1841 Female, age 85, right hemisphere 63.8
2848 Male, age 76, right hemisphere 62.6
Subiculum
nTPM: 69.7
2042 Male, age 76, both hemispheres 73.3
1901 Male, age 80, both hemispheres 72.7
1977 Female, age 85, both hemispheres 71.3
2438 Female, age 94, left hemisphere 67.6
2619 Male, age 74, both hemispheres 67.6
2729 Female, age 91, right hemisphere 65.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.5
Samples: 197

Max nTPM: 125.8
Min nTPM: 33.9
Std nTPM: 15.5
Median nTPM: 64.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 125.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 118.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 113.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 110.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 109.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 105.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 105.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 104.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 100.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 100.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 99.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.5
FF:10169-103B7 60 years, female 91.0
FF:10153-102I9 76 years, female 76.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.8
Sample A Female 17.6
Sample B Female 15.2
Sample C Male 14.8
Sample D Male 12.8
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.2
Sample A Female 12.2
Sample B Female 14.4
Sample C Male 13.0
Sample D Male 12.8
Subiculum
nTPM: 14.5
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.6
Sample A Female 15.7
Sample B Female 14.9
Sample C Male 13.6
Sample D Male 13.7
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.4
Sample A Female 16.2
Sample B Female 13.4
Sample C Male 18.6
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 38.7
Min nTPM: 28.1
Sample A Male 36.4
Sample B Male 38.7
Sample C Female 32.6
Sample D Female 28.1
Hippocampal formation
nTPM: 35.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 31.7
Sample A Male 31.7
Sample B Male 35.1
Sample C Female 35.4
Sample D Female 39.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68269712 Antisense, RP_041129_02_B01, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.