HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.8 nTPM
HPA:39.8 nTPM
GTEx:40.4 nTPM
FANTOM5:12.4 Scaled Tags Per Million
Mouse:48.3 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020961Antibody HPA059109
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 39.6
1898 Male, age 80, left hemisphere 43.2
1855 Male, age 76, left hemisphere 40.5
2529 Female, age 94, left hemisphere 39.2
1911 Female, age 85, right hemisphere 38.5
2148 Female, age 91, left hemisphere 38.3
2621 Female, age 67, right hemisphere 37.9
Dentate gyrus
nTPM: 38.4
2530 Female, age 94, left hemisphere 40.4
2010 Male, age 76, both hemispheres 39.7
2528 Male, age 74, both hemispheres 38.7
1927 Female, age 91, both hemispheres 37.4
2246 Female, age 85, both hemispheres 37.3
2531 Female, age 67, both hemispheres 37.0
Entorhinal gyrus
nTPM: 39.4
1787 Male, age 76, left hemisphere 40.8
2686 Male, age 75, right hemisphere 39.7
2764 Male, age 80, right hemisphere 39.6
2117 Female, age 91, right hemisphere 39.4
1938 Female, age 85, left hemisphere 39.0
2613 Female, age 94, left hemisphere 38.2
Hippocampus, CA1
nTPM: 39.0
2749 Male, age 80, left hemisphere 41.3
2045 Male, age 76, both hemispheres 39.7
1873 Female, age 85, both hemispheres 39.6
2082 Female, age 91, right hemisphere 38.2
2527 Male, age 74, both hemispheres 36.3
Hippocampus, CA2
nTPM: 39.8
2249 Male, age 74, both hemispheres 41.9
1892 Male, age 76, both hemispheres 41.2
1963 Male, age 80, left hemisphere 39.5
2113 Female, age 91, right hemisphere 39.1
1940 Female, age 85, left hemisphere 38.9
2437 Female, age 94, left hemisphere 38.4
Hippocampus, CA3
nTPM: 39.5
1867 Male, age 76, both hemispheres 40.9
2436 Male, age 74, both hemispheres 40.2
1891 Female, age 85, both hemispheres 39.8
2620 Female, age 94, left hemisphere 39.5
2861 Female, age 67, both hemispheres 38.5
2137 Male, age 80, left hemisphere 38.4
Parahippocampal cortex
nTPM: 38.2
1933 Female, age 85, both hemispheres 40.6
1850 Male, age 80, both hemispheres 40.3
2018 Male, age 76, both hemispheres 39.7
2250 Female, age 67, right hemisphere 38.0
1990 Female, age 91, right hemisphere 37.8
2622 Female, age 67, right hemisphere 37.7
2245 Female, age 91, both hemispheres 37.4
2532 Female, age 72, left hemisphere 36.9
2693 Female, age 94, both hemispheres 36.9
2692 Male, age 74, both hemispheres 36.4
Perirhinal gyrus
nTPM: 38.7
1847 Female, age 91, left hemisphere 40.1
1794 Male, age 80, right hemisphere 39.6
1841 Female, age 85, right hemisphere 39.6
2848 Male, age 76, right hemisphere 38.2
2521 Female, age 94, right hemisphere 36.3
Subiculum
nTPM: 38.3
2619 Male, age 74, both hemispheres 39.8
2042 Male, age 76, both hemispheres 38.7
2729 Female, age 91, right hemisphere 38.5
1901 Male, age 80, both hemispheres 37.9
2438 Female, age 94, left hemisphere 37.5
1977 Female, age 85, both hemispheres 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.4
Samples: 197

Max nTPM: 112.6
Min nTPM: 18.0
Std nTPM: 11.1
Median nTPM: 40.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 112.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 87.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 76.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 66.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 66.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 65.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 63.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 61.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 58.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 57.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.4
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 51.2
Min nTPM: 39.1
Sample A Male 48.3
Sample B Male 45.0
Sample C Female 51.2
Sample D Female 39.1
Hippocampal formation
nTPM: 48.3
Samples: 4

Max nTPM: 52.3
Min nTPM: 41.6
Sample A Male 52.3
Sample B Male 41.6
Sample C Female 47.4
Sample D Female 51.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
76003661 Antisense, RP_060608_03_A05, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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