HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:80.2 nTPM
HPA:80.2 nTPM
GTEx:64.1 nTPM
FANTOM5:64.9 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:23.4 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014859Antibody HPA063699
Glial cells LowLow
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.2
Sample id Sample description nTPM
Hippocampus
nTPM: 77.4
1898 Male, age 80, left hemisphere 83.1
1855 Male, age 76, left hemisphere 80.3
2621 Female, age 67, right hemisphere 76.3
2148 Female, age 91, left hemisphere 76.0
1911 Female, age 85, right hemisphere 74.7
2529 Female, age 94, left hemisphere 74.0
Dentate gyrus
nTPM: 76.6
2010 Male, age 76, both hemispheres 79.5
1927 Female, age 91, both hemispheres 78.1
2528 Male, age 74, both hemispheres 76.8
2246 Female, age 85, both hemispheres 76.4
2530 Female, age 94, left hemisphere 74.9
2531 Female, age 67, both hemispheres 73.9
Entorhinal gyrus
nTPM: 76.7
1787 Male, age 76, left hemisphere 79.3
2764 Male, age 80, right hemisphere 79.0
1938 Female, age 85, left hemisphere 77.2
2117 Female, age 91, right hemisphere 76.4
2613 Female, age 94, left hemisphere 75.1
2686 Male, age 75, right hemisphere 73.4
Hippocampus, CA1
nTPM: 79.4
2749 Male, age 80, left hemisphere 91.2
2045 Male, age 76, both hemispheres 80.1
2527 Male, age 74, both hemispheres 75.9
1873 Female, age 85, both hemispheres 75.8
2082 Female, age 91, right hemisphere 74.2
Hippocampus, CA2
nTPM: 76.8
1892 Male, age 76, both hemispheres 83.7
1963 Male, age 80, left hemisphere 78.9
2249 Male, age 74, both hemispheres 77.6
1940 Female, age 85, left hemisphere 74.0
2113 Female, age 91, right hemisphere 73.4
2437 Female, age 94, left hemisphere 73.2
Hippocampus, CA3
nTPM: 80.2
2137 Male, age 80, left hemisphere 85.5
2436 Male, age 74, both hemispheres 85.4
1867 Male, age 76, both hemispheres 80.1
2620 Female, age 94, left hemisphere 79.2
2861 Female, age 67, both hemispheres 77.3
1891 Female, age 85, both hemispheres 73.8
Parahippocampal cortex
nTPM: 75.7
1850 Male, age 80, both hemispheres 78.4
2692 Male, age 74, both hemispheres 77.7
2622 Female, age 67, right hemisphere 76.9
2245 Female, age 91, both hemispheres 76.4
1990 Female, age 91, right hemisphere 75.6
2018 Male, age 76, both hemispheres 75.2
2532 Female, age 72, left hemisphere 74.8
1933 Female, age 85, both hemispheres 74.7
2250 Female, age 67, right hemisphere 73.7
2693 Female, age 94, both hemispheres 73.4
Perirhinal gyrus
nTPM: 77.3
1847 Female, age 91, left hemisphere 80.1
1794 Male, age 80, right hemisphere 79.3
1841 Female, age 85, right hemisphere 76.2
2848 Male, age 76, right hemisphere 75.9
2521 Female, age 94, right hemisphere 74.9
Subiculum
nTPM: 74.8
1901 Male, age 80, both hemispheres 79.2
2438 Female, age 94, left hemisphere 75.4
2619 Male, age 74, both hemispheres 74.7
1977 Female, age 85, both hemispheres 74.3
2042 Male, age 76, both hemispheres 72.8
2729 Female, age 91, right hemisphere 72.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.1
Samples: 197

Max nTPM: 94.7
Min nTPM: 37.7
Std nTPM: 9.8
Median nTPM: 63.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 94.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 91.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 91.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 87.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 87.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 86.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 84.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 84.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 81.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.9
FF:10153-102I9 76 years, female 75.4
FF:10169-103B7 60 years, female 54.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 41.5
Min nTPM: 25.3
Sample A Female 41.5
Sample B Female 33.3
Sample C Male 34.1
Sample D Male 25.3
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.2
Sample A Female 29.5
Sample B Female 27.7
Sample C Male 25.6
Sample D Male 21.2
Subiculum
nTPM: 27.6
Samples: 4

Max nTPM: 35.5
Min nTPM: 24.5
Sample A Female 35.5
Sample B Female 25.5
Sample C Male 25.0
Sample D Male 24.5
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 36.9
Min nTPM: 20.6
Sample A Female 31.2
Sample B Female 20.6
Sample C Male 36.9
Sample D Male 33.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.0
Sample A Male 20.8
Sample B Male 19.7
Sample C Female 19.0
Sample D Female 24.5
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.5
Sample A Male 19.5
Sample B Male 22.9
Sample C Female 25.7
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
671235 Antisense, RP_040914_01_H12, Mouse strain C57BL/6J (56 days, male) 3.4

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