HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:18.3 nTPM
FANTOM5:11.5 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:15.3 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030162Antibody HPA030174
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
2621 Female, age 67, right hemisphere 15.4
2529 Female, age 94, left hemisphere 12.6
2148 Female, age 91, left hemisphere 12.5
1855 Male, age 76, left hemisphere 12.3
1898 Male, age 80, left hemisphere 11.9
1911 Female, age 85, right hemisphere 10.6
Dentate gyrus
nTPM: 12.3
2531 Female, age 67, both hemispheres 14.5
2530 Female, age 94, left hemisphere 13.9
1927 Female, age 91, both hemispheres 13.1
2246 Female, age 85, both hemispheres 11.7
2528 Male, age 74, both hemispheres 10.4
2010 Male, age 76, both hemispheres 10.1
Entorhinal gyrus
nTPM: 14.8
2613 Female, age 94, left hemisphere 18.8
2686 Male, age 75, right hemisphere 15.8
2764 Male, age 80, right hemisphere 15.7
1787 Male, age 76, left hemisphere 14.5
1938 Female, age 85, left hemisphere 13.5
2117 Female, age 91, right hemisphere 10.4
Hippocampus, CA1
nTPM: 11.2
2749 Male, age 80, left hemisphere 11.9
1873 Female, age 85, both hemispheres 11.6
2527 Male, age 74, both hemispheres 11.6
2082 Female, age 91, right hemisphere 10.6
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 12.3
2437 Female, age 94, left hemisphere 16.2
1892 Male, age 76, both hemispheres 14.7
1963 Male, age 80, left hemisphere 12.5
1940 Female, age 85, left hemisphere 10.7
2113 Female, age 91, right hemisphere 10.7
2249 Male, age 74, both hemispheres 9.1
Hippocampus, CA3
nTPM: 12.3
2861 Female, age 67, both hemispheres 18.6
2620 Female, age 94, left hemisphere 12.8
1867 Male, age 76, both hemispheres 11.4
2137 Male, age 80, left hemisphere 11.4
1891 Female, age 85, both hemispheres 10.9
2436 Male, age 74, both hemispheres 8.6
Parahippocampal cortex
nTPM: 14.4
2622 Female, age 67, right hemisphere 19.2
2532 Female, age 72, left hemisphere 15.5
2245 Female, age 91, both hemispheres 15.2
2692 Male, age 74, both hemispheres 14.8
2693 Female, age 94, both hemispheres 14.5
2250 Female, age 67, right hemisphere 13.7
1850 Male, age 80, both hemispheres 13.5
1933 Female, age 85, both hemispheres 13.3
1990 Female, age 91, right hemisphere 13.1
2018 Male, age 76, both hemispheres 11.7
Perirhinal gyrus
nTPM: 15.1
1794 Male, age 80, right hemisphere 16.1
2848 Male, age 76, right hemisphere 15.4
1841 Female, age 85, right hemisphere 14.9
2521 Female, age 94, right hemisphere 14.7
1847 Female, age 91, left hemisphere 14.6
Subiculum
nTPM: 11.8
2438 Female, age 94, left hemisphere 14.0
2619 Male, age 74, both hemispheres 14.0
1977 Female, age 85, both hemispheres 12.8
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 35.8
Min nTPM: 6.2
Std nTPM: 5.5
Median nTPM: 17.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 35.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 35.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 29.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 28.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 28.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 27.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 27.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.5
FF:10153-102I9 76 years, female 15.7
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.4
Min nTPM: 3.6
Sample A Female 6.1
Sample B Female 5.2
Sample C Male 6.4
Sample D Male 3.6
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.4
Sample A Female 5.4
Sample B Female 4.7
Sample C Male 6.5
Sample D Male 4.4
Subiculum
nTPM: 5.8
Samples: 4

Max nTPM: 8.1
Min nTPM: 3.9
Sample A Female 8.1
Sample B Female 4.9
Sample C Male 6.2
Sample D Male 3.9
Ventral hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 7.5
Min nTPM: 3.7
Sample A Female 5.5
Sample B Female 3.7
Sample C Male 7.5
Sample D Male 5.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 14.3
Sample A Male 16.0
Sample B Male 15.2
Sample C Female 14.3
Sample D Female 15.8
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 14.0
Sample C Female 12.2
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
2234 Antisense, RP_040526_01_E10, Mouse strain C57BL/6J (56 days, male) 6.4
2236 Antisense, RP_040526_01_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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