HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:100.1 nTPM
HPA:100.1 nTPM
GTEx:71.3 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Mouse:312.7 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039111
Glial cells Low
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.1
Sample id Sample description nTPM
Hippocampus
nTPM: 98.9
1898 Male, age 80, left hemisphere 103.4
2148 Female, age 91, left hemisphere 99.9
1855 Male, age 76, left hemisphere 99.1
2621 Female, age 67, right hemisphere 98.5
2529 Female, age 94, left hemisphere 96.9
1911 Female, age 85, right hemisphere 95.7
Dentate gyrus
nTPM: 98.8
1927 Female, age 91, both hemispheres 100.9
2010 Male, age 76, both hemispheres 100.2
2530 Female, age 94, left hemisphere 99.7
2528 Male, age 74, both hemispheres 98.5
2246 Female, age 85, both hemispheres 98.3
2531 Female, age 67, both hemispheres 95.3
Entorhinal gyrus
nTPM: 98.7
1938 Female, age 85, left hemisphere 102.6
2764 Male, age 80, right hemisphere 99.1
1787 Male, age 76, left hemisphere 97.9
2686 Male, age 75, right hemisphere 97.9
2613 Female, age 94, left hemisphere 97.8
2117 Female, age 91, right hemisphere 96.8
Hippocampus, CA1
nTPM: 100.1
2749 Male, age 80, left hemisphere 102.3
1873 Female, age 85, both hemispheres 101.7
2045 Male, age 76, both hemispheres 100.3
2082 Female, age 91, right hemisphere 99.3
2527 Male, age 74, both hemispheres 96.7
Hippocampus, CA2
nTPM: 99.6
1892 Male, age 76, both hemispheres 101.7
2249 Male, age 74, both hemispheres 100.9
1963 Male, age 80, left hemisphere 100.3
2437 Female, age 94, left hemisphere 98.8
1940 Female, age 85, left hemisphere 98.5
2113 Female, age 91, right hemisphere 97.4
Hippocampus, CA3
nTPM: 98.2
2137 Male, age 80, left hemisphere 101.6
1867 Male, age 76, both hemispheres 99.5
2436 Male, age 74, both hemispheres 98.8
1891 Female, age 85, both hemispheres 97.9
2861 Female, age 67, both hemispheres 96.3
2620 Female, age 94, left hemisphere 95.2
Parahippocampal cortex
nTPM: 99.2
1850 Male, age 80, both hemispheres 102.4
1933 Female, age 85, both hemispheres 102.4
2250 Female, age 67, right hemisphere 102.3
2245 Female, age 91, both hemispheres 100.4
2018 Male, age 76, both hemispheres 99.3
1990 Female, age 91, right hemisphere 99.2
2693 Female, age 94, both hemispheres 97.8
2532 Female, age 72, left hemisphere 97.1
2622 Female, age 67, right hemisphere 96.3
2692 Male, age 74, both hemispheres 95.3
Perirhinal gyrus
nTPM: 99.2
1847 Female, age 91, left hemisphere 102.6
1841 Female, age 85, right hemisphere 100.4
1794 Male, age 80, right hemisphere 99.7
2521 Female, age 94, right hemisphere 97.2
2848 Male, age 76, right hemisphere 95.9
Subiculum
nTPM: 98.7
2438 Female, age 94, left hemisphere 102.7
1977 Female, age 85, both hemispheres 100.3
1901 Male, age 80, both hemispheres 99.6
2042 Male, age 76, both hemispheres 97.8
2619 Male, age 74, both hemispheres 96.8
2729 Female, age 91, right hemisphere 94.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.3
Samples: 197

Max nTPM: 220.0
Min nTPM: 24.3
Std nTPM: 24.0
Median nTPM: 67.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 220.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 171.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 134.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 131.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 130.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 127.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 127.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 125.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 122.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 120.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 119.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.5
FF:10153-102I9 76 years, female 45.1
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 312.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 312.7
Samples: 4

Max nTPM: 327.7
Min nTPM: 284.2
Sample A Male 317.1
Sample B Male 327.7
Sample C Female 321.9
Sample D Female 284.2
Hippocampal formation
nTPM: 299.0
Samples: 4

Max nTPM: 336.3
Min nTPM: 278.4
Sample A Male 336.3
Sample B Male 280.9
Sample C Female 278.4
Sample D Female 300.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
68523348 Antisense, RP_050118_02_F01, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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